Radiogenomics in Clear Cell Renal Cell Carcinoma: Correlations Between Advanced CT Imaging (Texture Analysis) and MicroRNAs Expression.
Aged
Biomarkers, Tumor
Carcinoma, Renal Cell
/ diagnostic imaging
Female
Gene Expression Profiling
Gene Expression Regulation, Neoplastic
Genomics
/ methods
Humans
Image Processing, Computer-Assisted
Kidney Neoplasms
/ diagnostic imaging
Male
MicroRNAs
/ genetics
Middle Aged
Neoplasm Staging
Retrospective Studies
Tomography, X-Ray Computed
Transcriptome
microRNA
radiogenomics
renal cell carcinoma
texture analysis
Journal
Technology in cancer research & treatment
ISSN: 1533-0338
Titre abrégé: Technol Cancer Res Treat
Pays: United States
ID NLM: 101140941
Informations de publication
Date de publication:
01 01 2019
01 01 2019
Historique:
entrez:
1
10
2019
pubmed:
1
10
2019
medline:
27
2
2020
Statut:
ppublish
Résumé
A relevant challenge for the improvement of clear cell renal cell carcinoma management could derive from the identification of novel molecular biomarkers that could greatly improve the diagnosis, prognosis, and treatment choice of these neoplasms. In this study, we investigate whether quantitative parameters obtained from computed tomography texture analysis may correlate with the expression of selected oncogenic microRNAs. In a retrospective single-center study, multiphasic computed tomography examination (with arterial, portal, and urographic phases) was performed on 20 patients with clear cell renal cell carcinoma and computed tomography texture analysis parameters such as entropy, kurtosis, skewness, mean, and standard deviation of pixel distribution were measured using multiple filter settings. These quantitative data were correlated with the expression of selected microRNAs (miR-21-5p, miR-210-3p, miR-185-5p, miR-221-3p, miR-145-5p). Both the evaluations (microRNAs and computed tomography texture analysis) were performed on matched tumor and normal corticomedullar tissues of the same patients cohort. In this pilot study, we evidenced that computed tomography texture analysis has robust parameters (eg, entropy, mean, standard deviation) to distinguish normal from pathological tissues. Moreover, a higher coefficient of determination between entropy and miR-21-5p expression was evidenced in tumor versus normal tissue. Interestingly, entropy and miR-21-5p show promising correlation in clear cell renal cell carcinoma opening to a radiogenomic strategy to improve clear cell renal cell carcinoma management. In this pilot study, a promising correlation between microRNAs and computed tomography texture analysis has been found in clear cell renal cell carcinoma. A clear cell renal cell carcinoma can benefit from noninvasive evaluation of texture parameters in adjunction to biopsy results. In particular, a promising correlation between entropy and miR-21-5p was found.
Identifiants
pubmed: 31564221
doi: 10.1177/1533033819878458
pmc: PMC6767738
doi:
Substances chimiques
Biomarkers, Tumor
0
MicroRNAs
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
1533033819878458Références
Urol Oncol. 2017 Jan;35(1):36.e7-36.e14
pubmed: 27633984
J Cancer Res Clin Oncol. 2015 Jul;141(7):1291-9
pubmed: 25633718
Int J Mol Sci. 2015 Dec 08;16(12):29219-25
pubmed: 26670229
Clin Radiol. 2017 Jun;72(6):443-450
pubmed: 28258739
Cancer Biol Ther. 2014 Mar 1;15(3):329-41
pubmed: 24351440
Sci Rep. 2015 May 14;5:10272
pubmed: 25974855
Oncotarget. 2017 Jun 13;8(41):69551-69558
pubmed: 29050224
J Mol Diagn. 2010 Sep;12(5):687-96
pubmed: 20595629
CA Cancer J Clin. 2019 Jan;69(1):7-34
pubmed: 30620402
Invest Radiol. 2015 Apr;50(4):239-45
pubmed: 25501017
IEEE Trans Biomed Eng. 2008 Jul;55(7):1822-30
pubmed: 18595800
Mol Cancer Res. 2012 Jul;10(7):859-80
pubmed: 22638109
PLoS One. 2012;7(6):e38298
pubmed: 22745662
Nat Rev Urol. 2010 May;7(5):286-97
pubmed: 20368743
Phys Med Biol. 2018 Oct 24;63(21):215008
pubmed: 30277889
Urol Oncol. 2014 Jan;32(1):41.e1-9
pubmed: 24035473
Nat Rev Urol. 2018 Jul;15(7):430-451
pubmed: 29867106
Nature. 2013 Jul 4;499(7456):43-9
pubmed: 23792563
Nat Commun. 2014 Jun 03;5:4006
pubmed: 24892406
Eur Radiol. 2016 Jan;26(1):32-42
pubmed: 25956936
Radiology. 2014 Feb;270(2):464-71
pubmed: 24029645
Nat Rev Cancer. 2015 Jun;15(6):321-33
pubmed: 25998712
Nat Rev Urol. 2016 Dec;13(12):734-752
pubmed: 27804986
Radiology. 2014 Aug;272(2):484-93
pubmed: 24646147
Int J Clin Exp Pathol. 2015 May 01;8(5):5224-9
pubmed: 26191221
Abdom Imaging. 2015 Aug;40(6):1684-92
pubmed: 25753955
AJR Am J Roentgenol. 2016 Jul;207(1):96-105
pubmed: 27145377