Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments.
CO photolysis
XANES
cryo-trapping
crystal microspectroscopy
heme protein
neuroglobin
neuroprotection
oxygen binding
protein structure
soak-and-freeze pressurization
structural biology
structure determination
ultralow-temperature X-ray crystallography
Journal
IUCrJ
ISSN: 2052-2525
Titre abrégé: IUCrJ
Pays: England
ID NLM: 101623101
Informations de publication
Date de publication:
01 Sep 2019
01 Sep 2019
Historique:
received:
22
02
2019
accepted:
06
06
2019
entrez:
3
10
2019
pubmed:
3
10
2019
medline:
3
10
2019
Statut:
epublish
Résumé
A combined biophysical approach was applied to map gas-docking sites within murine neuroglobin (Ngb), revealing snapshots of events that might govern activity and dynamics in this unique hexacoordinate globin, which is most likely to be involved in gas-sensing in the central nervous system and for which a precise mechanism of action remains to be elucidated. The application of UV-visible microspectroscopy
Identifiants
pubmed: 31576217
doi: 10.1107/S2052252519008157
pii: jt5035
pmc: PMC6760443
doi:
Types de publication
Journal Article
Langues
eng
Pagination
832-842Informations de copyright
© Chiara Ardiccioni et al. 2019.
Références
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42
pubmed: 21460441
Biochemistry. 2012 Dec 18;51(50):9984-94
pubmed: 23176629
IUBMB Life. 2014 Apr;66(4):268-76
pubmed: 24753139
Nature. 1994 Oct 27;371(6500):808-12
pubmed: 7935843
J Biol Chem. 2001 Oct 19;276(42):38949-55
pubmed: 11473128
J Phys Chem B. 2010 Oct 21;114(41):13223-31
pubmed: 20879741
EMBO Rep. 2001 Aug;2(8):674-9
pubmed: 11493595
Science. 1995 Aug 18;269(5226):962-6
pubmed: 7638619
Inorg Chem. 2010 Nov 1;49(21):9958-61
pubmed: 20929251
J Am Chem Soc. 2010 Oct 27;132(42):14901-9
pubmed: 20919711
J Synchrotron Radiat. 2009 Mar;16(Pt 2):163-72
pubmed: 19240328
Biophys J. 2005 Apr;88(4):2954-64
pubmed: 15681649
Anesthesiology. 2014 Nov;121(5):1018-27
pubmed: 25211169
IUBMB Life. 2004 Nov-Dec;56(11-12):657-64
pubmed: 15804829
Sci Rep. 2017 May 12;7(1):1858
pubmed: 28500341
Acta Crystallogr D Biol Crystallogr. 2014 Apr;70(Pt 4):1005-14
pubmed: 24699645
Proteins. 1996 Jan;24(1):35-50
pubmed: 8628732
IUBMB Life. 2008 Mar;60(3):154-8
pubmed: 18380006
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67
pubmed: 21460454
J Phys Chem B. 2009 Nov 19;113(46):15334-43
pubmed: 19852453
Biopolymers. 2009 Dec;91(12):1097-107
pubmed: 19365817
Nat Struct Biol. 1997 Mar;4(3):209-14
pubmed: 9164462
Biophys Chem. 2000 Aug 30;86(2-3):221-30
pubmed: 11026686
Inorg Chem. 2008 Nov 3;47(21):9905-18
pubmed: 18837548
Biophys J. 2003 Jul;85(1):549-58
pubmed: 12829509
Sci Rep. 2019 Mar 29;9(1):5326
pubmed: 30926858
Science. 1987 Jan 16;235(4786):318-21
pubmed: 3798113
Proc Natl Acad Sci U S A. 2005 Aug 16;102(33):11704-9
pubmed: 16085709
Nature. 2000 Sep 28;407(6803):520-3
pubmed: 11029004
Acta Crystallogr D Biol Crystallogr. 2015 Jan 1;71(Pt 1):15-26
pubmed: 25615856
Methods Enzymol. 2008;437:439-57
pubmed: 18433641
J Am Chem Soc. 2004 Dec 1;126(47):15618-23
pubmed: 15563192
Arch Biochem Biophys. 2008 Jul 1;475(1):7-13
pubmed: 18406335
Acta Crystallogr D Biol Crystallogr. 1999 Mar;55(Pt 3):583-601
pubmed: 10089455
J Synchrotron Radiat. 2001 Jul 1;8(4):1087-94
pubmed: 11486360
Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):7992-7
pubmed: 12048231
Biochem Biophys Res Commun. 2004 Apr 16;316(4):1217-21
pubmed: 15044115
Acta Crystallogr D Biol Crystallogr. 2014 Jun;70(Pt 6):1640-8
pubmed: 24914975
Proc Natl Acad Sci U S A. 2007 Apr 10;104(15):6211-6
pubmed: 17404234
Curr Opin Struct Biol. 2000 Dec;10(6):744-52
pubmed: 11114513
Proc Natl Acad Sci U S A. 2006 Mar 28;103(13):4924-9
pubmed: 16547137
Proteins. 2004 Jul 1;56(1):85-92
pubmed: 15162488
Proc Natl Acad Sci U S A. 2005 Jun 14;102(24):8483-8
pubmed: 15932948
Biophys J. 2007 Jul 15;93(2):434-41
pubmed: 17468165
Biophys J. 2009 Sep 16;97(6):1700-8
pubmed: 19751675
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501
pubmed: 20383002
Nature. 2000 Mar 9;404(6774):205-8
pubmed: 10724176
Acta Crystallogr D Biol Crystallogr. 2006 Jan;62(Pt 1):48-57
pubmed: 16369093
Acta Crystallogr D Biol Crystallogr. 2007 May;63(Pt 5):621-7
pubmed: 17452787
J Biol Chem. 2004 May 14;279(20):21520-5
pubmed: 15016811
Phys Rev Lett. 2001 Oct 8;87(15):155501
pubmed: 11580707
Proc Natl Acad Sci U S A. 2000 Feb 29;97(5):2058-63
pubmed: 10681426
Phys Chem Chem Phys. 2014 Jan 28;16(4):1617-31
pubmed: 24317683
J Chem Theory Comput. 2016 Apr 12;12(4):2038-46
pubmed: 26938707
Neurosci Lett. 2008 Jan 10;430(2):135-7
pubmed: 18035490
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32
pubmed: 20124692
Biochemistry. 1994 Nov 15;33(45):13413-30
pubmed: 7947750
Biochemistry. 2015 Jan 27;54(3):722-33
pubmed: 25554946
Biochemistry. 1984 Jun 19;23(13):2849-57
pubmed: 6466620
Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):7039-44
pubmed: 12773618
J Biol Chem. 2011 May 20;286(20):18277-89
pubmed: 21296891
Science. 2015 Oct 23;350(6259):445-50
pubmed: 26359336
Biophys J. 2005 Jul;89(1):465-74
pubmed: 15849248
News Physiol Sci. 2004 Jun;19:110-3
pubmed: 15143204
Micron. 2004;35(1-2):67-9
pubmed: 15036294
Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):18984-9
pubmed: 19850865
Inorg Chem. 2009 May 4;48(9):3934-42
pubmed: 19326890
Proc Natl Acad Sci U S A. 2004 Dec 14;101(50):17351-6
pubmed: 15548613
Struct Dyn. 2018 Sep 12;5(5):054101
pubmed: 30246048