Field evaluation ratified by transcript and computational analyses unveils myco-protective role of SUGARWIN proteins in sugarcane.

Expression analysis Field evaluation In silico analysis Mycoprotective proteins Red rot

Journal

3 Biotech
ISSN: 2190-572X
Titre abrégé: 3 Biotech
Pays: Germany
ID NLM: 101565857

Informations de publication

Date de publication:
Oct 2019
Historique:
received: 18 06 2019
accepted: 16 09 2019
entrez: 8 10 2019
pubmed: 8 10 2019
medline: 8 10 2019
Statut: ppublish

Résumé

Nine elite sugarcane genotypes (SPF-234, CPF-246, CPF-247, CPF-248, HSF-240, CP-77-400, S-2006-US-658, S-2003-US-127 and S-2006-US-633) were assessed for field level tolerance against

Identifiants

pubmed: 31588401
doi: 10.1007/s13205-019-1896-0
pii: 1896
pmc: PMC6765628
doi:

Types de publication

Journal Article

Langues

eng

Pagination

377

Informations de copyright

© King Abdulaziz City for Science and Technology 2019.

Déclaration de conflit d'intérêts

Conflict of interestAuthors have no conflict of interest regarding publication of this manuscript.

Références

Mol Biol Evol. 2018 Jun 1;35(6):1547-1549
pubmed: 29722887
Protein Eng. 1990 Dec;4(2):155-61
pubmed: 2075190
Bioinformatics. 2000 Apr;16(4):404-5
pubmed: 10869041
Plant Mol Biol. 2009 Mar;69(4):473-88
pubmed: 19083153
Genet Mol Biol. 2017;40(1 suppl 1):360-372
pubmed: 28222203
J Mol Biol. 1982 May 5;157(1):105-32
pubmed: 7108955
Nature. 1992 Mar 5;356(6364):83-5
pubmed: 1538787
Proteins. 2001;Suppl 5:171-83
pubmed: 11835495
Nucleic Acids Res. 2003 Jul 1;31(13):3784-8
pubmed: 12824418
Methods Mol Biol. 2008;426:145-59
pubmed: 18542861
Genome. 2010 Nov;53(11):973-81
pubmed: 21076513
Methods Enzymol. 2003;374:461-91
pubmed: 14696385
Nucleic Acids Res. 2009 Jul;37(Web Server issue):W510-4
pubmed: 19429685
Comput Appl Biosci. 1995 Dec;11(6):681-4
pubmed: 8808585
Mol Plant Microbe Interact. 2012 May;25(5):613-24
pubmed: 22250584
J Biomol NMR. 1996 Dec;8(4):477-86
pubmed: 9008363
Cell Mol Life Sci. 2007 Nov;64(21):2726-32
pubmed: 17876517
PLoS One. 2014 Mar 07;9(3):e91159
pubmed: 24608349
Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85
pubmed: 26673716
Curr Protoc Bioinformatics. 2014 Sep 08;47:5.6.1-32
pubmed: 25199792
Protein Sci. 1993 Sep;2(9):1511-9
pubmed: 8401235
Arch Biochem Biophys. 1978 Jan 30;185(2):584-91
pubmed: 626512
Front Plant Sci. 2019 Jan 07;9:1916
pubmed: 30666261
Plant Methods. 2017 Apr 17;13:28
pubmed: 28428808

Auteurs

Aqsa Parvaiz (A)

1Center of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, University Road, Faisalabad, Punjab 38040 Pakistan.

Ghulam Mustafa (G)

1Center of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, University Road, Faisalabad, Punjab 38040 Pakistan.

Hafiz Muhammad Walayat Ali Khan (HMWA)

2Sugarcane Research Institute, Ayub Agricultural Research Institute, Jhang Road, Faisalabad, Pakistan.

Faiz Ahmad Joyia (FA)

1Center of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, University Road, Faisalabad, Punjab 38040 Pakistan.

Adnan Khan Niazi (AK)

1Center of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, University Road, Faisalabad, Punjab 38040 Pakistan.

Sultana Anwar (S)

1Center of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, University Road, Faisalabad, Punjab 38040 Pakistan.

Muhammad Sarwar Khan (MS)

1Center of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, University Road, Faisalabad, Punjab 38040 Pakistan.

Classifications MeSH