Bile acids targeted metabolomics and medication classification data in the ADNI1 and ADNIGO/2 cohorts.


Journal

Scientific data
ISSN: 2052-4463
Titre abrégé: Sci Data
Pays: England
ID NLM: 101640192

Informations de publication

Date de publication:
17 10 2019
Historique:
received: 19 03 2019
accepted: 10 07 2019
entrez: 19 10 2019
pubmed: 19 10 2019
medline: 8 10 2020
Statut: epublish

Résumé

Alzheimer's disease (AD) is the most common cause of dementia. The mechanism of disease development and progression is not well understood, but increasing evidence suggests multifactorial etiology, with a number of genetic, environmental, and aging-related factors. There is a growing body of evidence that metabolic defects may contribute to this complex disease. To interrogate the relationship between system level metabolites and disease susceptibility and progression, the AD Metabolomics Consortium (ADMC) in partnership with AD Neuroimaging Initiative (ADNI) is creating a comprehensive biochemical database for patients in the ADNI1 cohort. We used the Biocrates Bile Acids platform to evaluate the association of metabolic levels with disease risk and progression. We detail the quantitative metabolomics data generated on the baseline samples from ADNI1 and ADNIGO/2 (370 cognitively normal, 887 mild cognitive impairment, and 305 AD). Similar to our previous reports on ADNI1, we present the tools for data quality control and initial analysis. This data descriptor represents the third in a series of comprehensive metabolomics datasets from the ADMC on the ADNI.

Identifiants

pubmed: 31624257
doi: 10.1038/s41597-019-0181-8
pii: 10.1038/s41597-019-0181-8
pmc: PMC6797798
doi:

Substances chimiques

Bile Acids and Salts 0

Types de publication

Dataset Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

212

Subventions

Organisme : U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging)
ID : R01AG046171
Pays : International
Organisme : U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging)
ID : R01AG0151550
Pays : International
Organisme : NIA NIH HHS
ID : U01 AG024904
Pays : United States

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Auteurs

Lisa St John-Williams (L)

Proteomics and Metabolomics Shared Resource, Center for Genomics and Computational Biology, Duke University, Durham, NC, USA.

Siamak Mahmoudiandehkordi (S)

Department of Psychiatry & Behavioral Sciences, Duke University, Durham, NC, USA.

Matthias Arnold (M)

Department of Psychiatry & Behavioral Sciences, Duke University, Durham, NC, USA.
Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.

Tyler Massaro (T)

Duke Clinical Research Institute, Duke University, Durham, NC, USA.

Colette Blach (C)

Duke Molecular Physiology Institute, Duke University, Durham, NC, USA.

Gabi Kastenmüller (G)

Institute of Bioinformatics and Systems Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany.
German Center for Diabetes Research, Neuherberg, Germany.

Gregory Louie (G)

Department of Psychiatry & Behavioral Sciences, Duke University, Durham, NC, USA.

Alexandra Kueider-Paisley (A)

Department of Psychiatry & Behavioral Sciences, Duke University, Durham, NC, USA.

Xianlin Han (X)

University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.

Rebecca Baillie (R)

Rosa & Co LLC, San Carlos, CA, USA.

Alison A Motsinger-Reif (AA)

Bioinformatics Research Center, Department of Statistics, North Carolina State University, Raleigh, NC, USA.

Daniel Rotroff (D)

Department of Quantitative Health Sciences, Cleveland Clinic, Cleveland, OH, USA.

Kwangsik Nho (K)

Department of Radiology and Imaging Sciences and the Indiana Alzheimer Disease Center, Indiana University School of Medicine, Indianapolis, IN, USA.

Andrew J Saykin (AJ)

Department of Radiology and Imaging Sciences and the Indiana Alzheimer Disease Center, Indiana University School of Medicine, Indianapolis, IN, USA.

Shannon L Risacher (SL)

Department of Radiology and Imaging Sciences and the Indiana Alzheimer Disease Center, Indiana University School of Medicine, Indianapolis, IN, USA.

Therese Koal (T)

BIOCRATES Life Sciences AG, Innsbruck, Austria.

M Arthur Moseley (MA)

Proteomics and Metabolomics Shared Resource, Center for Genomics and Computational Biology, Duke University, Durham, NC, USA.

Jessica D Tenenbaum (JD)

Department of Biostatistics and Bioinformatics, Duke University, Durham, NC, USA.

J Will Thompson (JW)

Proteomics and Metabolomics Shared Resource, Center for Genomics and Computational Biology, Duke University, Durham, NC, USA.

Rima Kaddurah-Daouk (R)

Department of Psychiatry & Behavioral Sciences, Duke University, Durham, NC, USA. kaddu001@mc.duke.edu.
Duke Institute for Brain Sciences, Duke University, Durham, NC, USA. kaddu001@mc.duke.edu.

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