The FluPRINT dataset, a multidimensional analysis of the influenza vaccine imprint on the immune system.
Journal
Scientific data
ISSN: 2052-4463
Titre abrégé: Sci Data
Pays: England
ID NLM: 101640192
Informations de publication
Date de publication:
21 10 2019
21 10 2019
Historique:
received:
07
02
2019
accepted:
27
08
2019
entrez:
23
10
2019
pubmed:
23
10
2019
medline:
8
10
2020
Statut:
epublish
Résumé
Machine learning has the potential to identify novel biological factors underlying successful antibody responses to influenza vaccines. The first attempts have revealed a high level of complexity in establishing influenza immunity, and many different cellular and molecular components are involved. Of note is that the previously identified correlates of protection fail to account for the majority of individual responses across different age groups and influenza seasons. Challenges remain from the small sample sizes in most studies and from often limited data sets, such as transcriptomic data. Here we report the creation of a unified database, FluPRINT, to enable large-scale studies exploring the cellular and molecular underpinnings of successful antibody responses to influenza vaccines. Over 3,000 parameters were considered, including serological responses to influenza strains, serum cytokines, cell phenotypes, and cytokine stimulations. FluPRINT, facilitates the application of machine learning algorithms for data mining. The data are publicly available and represent a resource to uncover new markers and mechanisms that are important for influenza vaccine immunogenicity.
Identifiants
pubmed: 31636302
doi: 10.1038/s41597-019-0213-4
pii: 10.1038/s41597-019-0213-4
pmc: PMC6803714
doi:
Substances chimiques
Cytokines
0
Influenza Vaccines
0
Types de publication
Dataset
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
214Subventions
Organisme : NCRR NIH HHS
ID : UL1 RR025744
Pays : United States
Organisme : EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020)
ID : FluPRINT, No 796636
Pays : International
Organisme : NIAID NIH HHS
ID : U19 AI090019
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR003142
Pays : United States
Organisme : Howard Hughes Medical Institute
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI057229
Pays : United States
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