Malaria risk assessment and mapping using satellite imagery and boosted regression trees in the Peruvian Amazon.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
23 10 2019
Historique:
received: 23 07 2019
accepted: 02 10 2019
entrez: 25 10 2019
pubmed: 28 10 2019
medline: 30 10 2020
Statut: epublish

Résumé

This is the first study to assess the risk of co-endemic Plasmodium vivax and Plasmodium falciparum transmission in the Peruvian Amazon using boosted regression tree (BRT) models based on social and environmental predictors derived from satellite imagery and data. Yearly cross-validated BRT models were created to discriminate high-risk (annual parasite index API > 10 cases/1000 people) and very-high-risk for malaria (API > 50 cases/1000 people) in 2766 georeferenced villages of Loreto department, between 2010-2017 as other parts in the article (graphs, tables, and texts). Predictors were cumulative annual rainfall, forest coverage, annual forest loss, annual mean land surface temperature, normalized difference vegetation index (NDVI), normalized difference water index (NDWI), shortest distance to rivers, time to populated villages, and population density. BRT models built with predictor data of a given year efficiently discriminated the malaria risk for that year in villages (area under the ROC curve (AUC) > 0.80), and most models also effectively predicted malaria risk in the following year. Cumulative rainfall, population density and time to populated villages were consistently the top three predictors for both P. vivax and P. falciparum incidence. Maps created using the BRT models characterize the spatial distribution of the malaria incidence in Loreto and should contribute to malaria-related decision making in the area.

Identifiants

pubmed: 31645604
doi: 10.1038/s41598-019-51564-4
pii: 10.1038/s41598-019-51564-4
pmc: PMC6811674
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

15173

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Auteurs

Elisa Solano-Villarreal (E)

Université de Liège, 4000, Liège, Belgium. elitayoan@gmail.com.
Research Institute of Health and Society (IRSS), Université catholique de Louvain, 1200, Brussels, Belgium. elitayoan@gmail.com.
Institute of Tropical Medicine Alexander von Humboldt, Universidad Peruana Cayetano Heredia, Lima, 15102, Peru. elitayoan@gmail.com.

Walter Valdivia (W)

Ministry of Development and Social Inclusion, Lima, 15047, Peru.

Morgan Pearcy (M)

Research Institute of Health and Society (IRSS), Université catholique de Louvain, 1200, Brussels, Belgium.

Catherine Linard (C)

Namur Research Institute for Life Sciences (Narilis), Université de Namur, 5000, Namur, Belgium.
Institute of Life-Earth-Environment (ILEE), 5000, Namur, Belgium.

José Pasapera-Gonzales (J)

National Aerospace Development Commission, Lima, 15046, Peru.

Diamantina Moreno-Gutierrez (D)

Research Institute of Health and Society (IRSS), Université catholique de Louvain, 1200, Brussels, Belgium.
University of Antwerp, 2000, Antwerp, Belgium.
Faculty of Human Medicine, Universidad Nacional de la Amazonía Peruana, Loreto, 160, Peru.

Philippe Lejeune (P)

Université de Liège, 4000, Liège, Belgium.

Alejandro Llanos-Cuentas (A)

Institute of Tropical Medicine Alexander von Humboldt, Universidad Peruana Cayetano Heredia, Lima, 15102, Peru.

Niko Speybroeck (N)

Research Institute of Health and Society (IRSS), Université catholique de Louvain, 1200, Brussels, Belgium.

Marie-Pierre Hayette (MP)

Université de Liège, 4000, Liège, Belgium.

Angel Rosas-Aguirre (A)

Research Institute of Health and Society (IRSS), Université catholique de Louvain, 1200, Brussels, Belgium.
Institute of Tropical Medicine Alexander von Humboldt, Universidad Peruana Cayetano Heredia, Lima, 15102, Peru.
Fonds de la Recherche Scientifique (FNRS), 1000, Brussels, Belgium.

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