Transient flow prediction in an idealized aneurysm geometry using data assimilation.


Journal

Computers in biology and medicine
ISSN: 1879-0534
Titre abrégé: Comput Biol Med
Pays: United States
ID NLM: 1250250

Informations de publication

Date de publication:
12 2019
Historique:
received: 09 07 2019
revised: 27 09 2019
accepted: 12 10 2019
pubmed: 8 11 2019
medline: 23 9 2020
entrez: 8 11 2019
Statut: ppublish

Résumé

Hemodynamic simulations are restricted by modeling assumptions and uncertain initial and boundary conditions, whereas Phase-Contrast Magnetic Resonance Imaging (PC-MRI) data is affected by measurement noise and artifacts. To overcome the limitations of both techniques, the current study uses a Localization Ensemble Transform Kalman Filter (LETKF) to fully incorporate noisy, low-resolution Phase-Contrast MRI data into an ensemble of high-resolution numerical simulations. The analysis output provides an improved state estimate of the three-dimensional blood flow field in an intracranial aneurysm model. Benchmark measurements are carried out in a silicone phantom model of an idealized aneurysm under pulsatile inflow conditions. Validation is ensured with high-resolution Particle Imaging Velocimetry (PIV) obtained in the symmetry plane of the same geometry. Two data assimilation approaches are introduced, which differ in their way to propagate the ensemble members in time. In both cases the velocity noise is significantly reduced over the whole cardiac cycle. Quantitative and qualitative results indicate an improvement of the flow field prediction in comparison to the raw measurement data. Although biased measurement data reveal a systematic deviation from the truth, the LETKF is able to account for stochastically distributed errors. Through the implementation of the data assimilation step, physical constraints are introduced into the raw measurement data. The resulting, realistic high-resolution flow field can be readily used to assess further patient-specific parameters in addition to the velocity distribution, such as wall shear stress or pressure.

Identifiants

pubmed: 31698232
pii: S0010-4825(19)30371-3
doi: 10.1016/j.compbiomed.2019.103507
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

103507

Informations de copyright

Copyright © 2019 Elsevier Ltd. All rights reserved.

Auteurs

Franziska Gaidzik (F)

Lab. of Fluid Dynamics and Technical Flows, Otto von Guericke University Magdeburg, Germany.

Daniel Stucht (D)

Institute of Experimental Physics, Otto von Guericke University Magdeburg, Germany; Institute of Biometry and Medical Informatics, Otto von Guericke University Magdeburg, Germany.

Christoph Roloff (C)

Lab. of Fluid Dynamics and Technical Flows, Otto von Guericke University Magdeburg, Germany.

Oliver Speck (O)

Institute of Experimental Physics, Otto von Guericke University Magdeburg, Germany; Leibniz Institute for Neurobiology, Magdeburg, Germany.

Dominique Thévenin (D)

Lab. of Fluid Dynamics and Technical Flows, Otto von Guericke University Magdeburg, Germany.

Gábor Janiga (G)

Lab. of Fluid Dynamics and Technical Flows, Otto von Guericke University Magdeburg, Germany. Electronic address: janiga@ovgu.de.

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Classifications MeSH