Expansion of LINEs and species-specific DNA repeats drives genome expansion in Asian Gypsy Moths.
Animals
Computational Biology
/ methods
DNA Transposable Elements
Energy Metabolism
Genetic Variation
Genome, Insect
Genome-Wide Association Study
Genomics
/ methods
Long Interspersed Nucleotide Elements
Metabolic Networks and Pathways
Moths
/ genetics
Repetitive Sequences, Nucleic Acid
Species Specificity
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
11 11 2019
11 11 2019
Historique:
received:
30
01
2019
accepted:
18
10
2019
entrez:
13
11
2019
pubmed:
13
11
2019
medline:
11
11
2020
Statut:
epublish
Résumé
Two subspecies of Asian gypsy moth (AGM), Lymantria dispar asiatica and L. dispar japonica, pose a serious alien invasive threat to North American forests. Despite decades of research on the ecology and biology of this pest, limited AGM-specific genomic resources are currently available. Here, we report on the genome sequences and functional content of these AGM subspecies. The genomes of L.d. asiatica and L.d. japonica are the largest lepidopteran genomes sequenced to date, totaling 921 and 999 megabases, respectively. Large genome size in these subspecies is driven by the accumulation of specific classes of repeats. Genome-wide metabolic pathway reconstructions suggest strong genomic signatures of energy-related pathways in both subspecies, dominated by metabolic functions related to thermogenesis. The genome sequences reported here will provide tools for probing the molecular mechanisms underlying phenotypic traits that are thought to enhance AGM invasiveness.
Identifiants
pubmed: 31712581
doi: 10.1038/s41598-019-52840-z
pii: 10.1038/s41598-019-52840-z
pmc: PMC6848174
doi:
Substances chimiques
DNA Transposable Elements
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
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