Development of molecular markers for invasive alien plants in Korea: a case study of a toxic weed,
Cenchrus echinatus
Cenchrus longispinus
Chloroplast genome
Invasive alien plants
Molecular markers
Journal
PeerJ
ISSN: 2167-8359
Titre abrégé: PeerJ
Pays: United States
ID NLM: 101603425
Informations de publication
Date de publication:
2019
2019
Historique:
received:
09
07
2019
accepted:
30
09
2019
entrez:
19
11
2019
pubmed:
19
11
2019
medline:
19
11
2019
Statut:
epublish
Résumé
Genomic data play an important role in plant research because of its implications in studying genomic evolution, phylogeny, and developing molecular markers. Although the information of invasive alien plants was collected, the genomic data of those species have not been intensively studied. We employ the next generation sequencing and PCR methods to explore the genomic data as well as to develop and test the molecular markers. In this study, we characterize the chloroplast genomes (cpDNA) of
Sections du résumé
BACKGROUND
BACKGROUND
Genomic data play an important role in plant research because of its implications in studying genomic evolution, phylogeny, and developing molecular markers. Although the information of invasive alien plants was collected, the genomic data of those species have not been intensively studied.
METHODS
METHODS
We employ the next generation sequencing and PCR methods to explore the genomic data as well as to develop and test the molecular markers.
RESULTS
RESULTS
In this study, we characterize the chloroplast genomes (cpDNA) of
Identifiants
pubmed: 31737445
doi: 10.7717/peerj.7965
pii: 7965
pmc: PMC6855208
doi:
Types de publication
Journal Article
Langues
eng
Pagination
e7965Commentaires et corrections
Type : ErratumIn
Informations de copyright
© 2019 Hyun et al.
Déclaration de conflit d'intérêts
The authors declare that they have no competing interests.
Références
Plant Cell Rep. 2013 Mar;32(3):379-88
pubmed: 23233129
Mol Biol Evol. 2008 Jul;25(7):1253-6
pubmed: 18397919
Nucleic Acids Res. 2012 Aug;40(15):e115
pubmed: 22730293
BMC Evol Biol. 2019 Jan 25;19(1):33
pubmed: 30683070
Nucleic Acids Res. 2016 Jul 8;44(W1):W232-5
pubmed: 27084950
Genome Res. 2004 Jul;14(7):1394-403
pubmed: 15231754
Genome Biol Evol. 2019 Apr 1;11(4):1321-1333
pubmed: 31046101
Appl Plant Sci. 2013 Nov 07;1(11):
pubmed: 25202497
Front Plant Sci. 2017 Jul 06;8:1189
pubmed: 28729877
Methods Mol Biol. 2019;1962:1-14
pubmed: 31020551
Front Plant Sci. 2017 Mar 10;8:334
pubmed: 28344587
Plant Mol Biol. 1992 May;19(1):149-68
pubmed: 1600166
Front Genet. 2019 Dec 06;10:1223
pubmed: 31867041
Front Plant Sci. 2019 Jan 24;9:1993
pubmed: 30733728
BMC Evol Biol. 2008 Jan 31;8:36
pubmed: 18237435
Sci Rep. 2018 Jan 31;8(1):1924
pubmed: 29386579
PeerJ. 2018 Feb 2;6:e4299
pubmed: 29416954
Proc Natl Acad Sci U S A. 1992 Aug 15;89(16):7722-6
pubmed: 1502190
Mol Biol Evol. 2002 Dec;19(12):2084-91
pubmed: 12446800
PLoS One. 2018 Feb 21;13(2):e0191529
pubmed: 29466405
Appl Plant Sci. 2013 Jun 21;1(7):
pubmed: 25202564
Planta. 2018 Mar;247(3):543-557
pubmed: 29243155
Mitochondrial DNA B Resour. 2018 Jun 11;3(2):674-675
pubmed: 33474281
Bioinformatics. 2012 Jun 15;28(12):1647-9
pubmed: 22543367
PLoS One. 2017 Jun 15;12(6):e0179055
pubmed: 28617867
Syst Biol. 2012 May;61(3):539-42
pubmed: 22357727
Mol Phylogenet Evol. 2000 Apr;15(1):135-46
pubmed: 10764541
Nucleic Acids Res. 2019 Jul 2;47(W1):W59-W64
pubmed: 30949694
G3 (Bethesda). 2013 Apr 9;3(4):607-616
pubmed: 23550121
BMC Plant Biol. 2016 Jun 18;16(1):140
pubmed: 27316745
Mitochondrial DNA B Resour. 2018 Nov 25;4(1):51-52
pubmed: 33365415
Front Plant Sci. 2016 Mar 21;7:341
pubmed: 27047519
PLoS One. 2015 Jun 25;10(6):e0130854
pubmed: 26110423
Ann Bot. 2010 Jul;106(1):107-30
pubmed: 20570830
Nucleic Acids Res. 2004 Mar 19;32(5):1792-7
pubmed: 15034147
BMC Genomics. 2017 Jan 11;18(1):69
pubmed: 28077077
Nucleic Acids Res. 2001 Nov 15;29(22):4633-42
pubmed: 11713313
PLoS One. 2016 Mar 17;11(3):e0150947
pubmed: 26985664
PLoS One. 2013 Oct 18;8(10):e78568
pubmed: 24205264