Relaxation Dynamics of Hydrated Thymine, Thymidine, and Thymidine Monophosphate Probed by Liquid Jet Time-Resolved Photoelectron Spectroscopy.


Journal

The journal of physical chemistry. A
ISSN: 1520-5215
Titre abrégé: J Phys Chem A
Pays: United States
ID NLM: 9890903

Informations de publication

Date de publication:
19 Dec 2019
Historique:
pubmed: 23 11 2019
medline: 23 11 2019
entrez: 23 11 2019
Statut: ppublish

Résumé

The relaxation dynamics of thymine and its derivatives thymidine and thymidine monophosphate are studied using time-resolved photoelectron spectroscopy applied to a water microjet. Two absorption bands are studied; the first is a bright ππ* state which is populated using tunable-ultraviolet light in the range 4.74-5.17 eV and probed using a 6.20 eV probe pulse. By reversing the order of these pulses, a band containing multiple ππ* states is populated by the 6.20 eV pulse and the lower energy pulse serves as the probe. The lower lying ππ* state is found to decay in ∼400 fs in both thymine and thymidine independent of pump photon energy, while thymidine monophosphate decays vary from 670 to 840 fs with some pump energy dependence. The application of a computational quantum mechanical/molecular mechanical scheme at the XMS-CASPT2//CASSCF/AMBER level of theory suggests that conformational differences existing between thymidine and thymidine monophosphate in solution account for this difference. The higher lying ππ* band is found to decay in ∼600 fs in all three cases, but it is only able to be characterized when the 5.17 eV probe pulse is used. Notably, no long-lived signal from an nπ* state can be identified in either experiment on any of the three molecules.

Identifiants

pubmed: 31756106
doi: 10.1021/acs.jpca.9b08258
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

10676-10684

Auteurs

Blake A Erickson (BA)

Department of Chemistry , University of California , Berkeley , California 94720 , United States.

Zachary N Heim (ZN)

Department of Chemistry , University of California , Berkeley , California 94720 , United States.

Elisa Pieri (E)

Department of Chemistry , Stanford University , Stanford , California 94305 , United States.

Erica Liu (E)

Department of Chemistry , University of California , Berkeley , California 94720 , United States.

Todd J Martinez (TJ)

Department of Chemistry , Stanford University , Stanford , California 94305 , United States.

Daniel M Neumark (DM)

Department of Chemistry , University of California , Berkeley , California 94720 , United States.
Chemical Sciences Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States.

Classifications MeSH