Bifidobacterial Distribution Across Italian Cheeses Produced from Raw Milk.

bifidobacteria cheese metagenomics microbiota profiling

Journal

Microorganisms
ISSN: 2076-2607
Titre abrégé: Microorganisms
Pays: Switzerland
ID NLM: 101625893

Informations de publication

Date de publication:
21 Nov 2019
Historique:
received: 30 09 2019
revised: 06 11 2019
accepted: 19 11 2019
entrez: 27 11 2019
pubmed: 27 11 2019
medline: 27 11 2019
Statut: epublish

Résumé

Cheese microbiota is of high industrial relevance due to its crucial role in defining the organoleptic features of the final product. Nevertheless, the composition of and possible microbe-microbe interactions between these bacterial populations have never been assessed down to the species-level. For this reason, 16S rRNA gene microbial profiling combined with internally transcribed spacer (ITS)-mediated bifidobacterial profiling analyses of various cheeses produced with raw milk were performed in order to achieve an in-depth view of the bifidobacterial populations present in these microbially fermented food matrices. Moreover, statistical elaboration of the data collected in this study revealed the existence of community state types characterized by the dominance of specific microbial genera that appear to shape the overall cheese microbiota through an interactive network responsible for species-specific modulatory effects on the bifidobacterial population.

Identifiants

pubmed: 31766566
pii: microorganisms7120599
doi: 10.3390/microorganisms7120599
pmc: PMC6955966
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Science Foundation Ireland
ID : 15/JP-HDHL/3280
Pays : Ireland
Organisme : Fondazione Cariparma
ID : -

Déclaration de conflit d'intérêts

The authors declare that they have no competing interests.

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Auteurs

Christian Milani (C)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

Giulia Alessandri (G)

Department of Veterinary Medical Science, University of Parma, 43124 Parma, Italy.

Leonardo Mancabelli (L)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

Gabriele Andrea Lugli (GA)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

Giulia Longhi (G)

GenProbio srl, 43124 Parma, Italy.

Rosaria Anzalone (R)

GenProbio srl, 43124 Parma, Italy.

Alice Viappiani (A)

GenProbio srl, 43124 Parma, Italy.

Sabrina Duranti (S)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

Francesca Turroni (F)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.
Microbiome Research Hub, University of Parma, 43124 Parma, Italy.

Maria Cristina Ossiprandi (MC)

Department of Veterinary Medical Science, University of Parma, 43124 Parma, Italy.
Microbiome Research Hub, University of Parma, 43124 Parma, Italy.

Douwe van Sinderen (D)

APC Microbiome Institute and School of Microbiology, Bioscience Institute, National University of Ireland, T12 YT20 Cork, Ireland.

Marco Ventura (M)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.
Microbiome Research Hub, University of Parma, 43124 Parma, Italy.

Classifications MeSH