Electron Microscopic Detection of Single Membrane Proteins by a Specific Chemical Labeling.

Biochemistry Methods Nanoparticles Structural Biology

Journal

iScience
ISSN: 2589-0042
Titre abrégé: iScience
Pays: United States
ID NLM: 101724038

Informations de publication

Date de publication:
20 Dec 2019
Historique:
received: 12 04 2019
revised: 26 10 2019
accepted: 12 11 2019
pubmed: 2 12 2019
medline: 2 12 2019
entrez: 2 12 2019
Statut: ppublish

Résumé

Electron microscopy (EM) is a technology that enables visualization of single proteins at a nanometer resolution. However, current protein analysis by EM mainly relies on immunolabeling with gold-particle-conjugated antibodies, which is compromised by large size of antibody, precluding precise detection of protein location in biological samples. Here, we develop a specific chemical labeling method for EM detection of proteins at single-molecular level. Rational design of α-helical peptide tag and probe structure provided a complementary reaction pair that enabled specific cysteine conjugation of the tag. The developed chemical labeling with gold-nanoparticle-conjugated probe showed significantly higher labeling efficiency and detectability of high-density clusters of tag-fused G protein-coupled receptors in freeze-fracture replicas compared with immunogold labeling. Furthermore, in ultrathin sections, the spatial resolution of the chemical labeling was significantly higher than that of antibody-mediated labeling. These results demonstrate substantial advantages of the chemical labeling approach for single protein visualization by EM.

Identifiants

pubmed: 31786521
pii: S2589-0042(19)30475-4
doi: 10.1016/j.isci.2019.11.025
pmc: PMC6906691
pii:
doi:

Types de publication

Journal Article

Langues

eng

Pagination

256-268

Informations de copyright

Copyright © 2019 The Author(s). Published by Elsevier Inc. All rights reserved.

Références

Nat Chem Biol. 2014 Jul;10(7):512-23
pubmed: 24937069
Nat Chem Biol. 2015 Dec;11(12):917-23
pubmed: 26575238
Curr Opin Neurobiol. 2007 Jun;17(3):387-93
pubmed: 17499496
J Histochem Cytochem. 2000 Apr;48(4):471-80
pubmed: 10727288
Immunochemistry. 1971 Nov;8(11):1081-3
pubmed: 4110101
J Med Chem. 2014 Dec 11;57(23):10072-9
pubmed: 25375838
Histochem Cell Biol. 2018 Jan;149(1):3-13
pubmed: 29134300
Proc Natl Acad Sci U S A. 2017 Jun 27;114(26):E5246-E5255
pubmed: 28607047
Nat Chem. 2016 Feb;8(2):103-13
pubmed: 26791892
J Mol Biol. 2007 Sep 21;372(3):798-816
pubmed: 17681533
Bioconjug Chem. 2001 Nov-Dec;12(6):1051-6
pubmed: 11716699
Chem Commun (Camb). 2013 Jun 4;49(44):5022-4
pubmed: 23612601
Mol Biol Cell. 2007 Jun;18(6):2112-22
pubmed: 17392511
Cell. 2012 Aug 31;150(5):1068-81
pubmed: 22939629
Nat Commun. 2018 Aug 17;9(1):3307
pubmed: 30120230
Biochemistry. 2006 Apr 18;45(15):4785-96
pubmed: 16605247
Biochemistry. 1998 Jun 23;37(25):8965-72
pubmed: 9636038
J Am Chem Soc. 2010 Jul 14;132(27):9301-9
pubmed: 20568758
Nat Biotechnol. 2012 Nov;30(11):1143-8
pubmed: 23086203
Nat Chem. 2016 Feb;8(2):120-8
pubmed: 26791894
PLoS Biol. 2011 Apr;9(4):e1001041
pubmed: 21483721
J Cell Sci. 1995 Nov;108 ( Pt 11):3443-9
pubmed: 8586656
Mol Biosyst. 2016 May 24;12(6):1731-45
pubmed: 26960991
J Mol Biol. 1995 Nov 10;253(5):799-812
pubmed: 7473753
Inorg Chem. 2014 Feb 17;53(4):1816-23
pubmed: 24131471
J Med Chem. 2003 Jan 2;46(1):49-63
pubmed: 12502359
Curr Opin Chem Biol. 2010 Aug;14(4):475-80
pubmed: 20609616
J Am Chem Soc. 2016 May 4;138(17):5499-502
pubmed: 27082895
Science. 1998 Jul 10;281(5374):269-72
pubmed: 9657724
Curr Opin Biotechnol. 2017 Dec;48:61-68
pubmed: 28395178
FEBS Lett. 2015 Sep 14;589(19 Pt A):2590-602
pubmed: 25913176

Auteurs

Shigekazu Tabata (S)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan; Institute of Science and Technology Austria, 3400 Klosterneuburg, Austria.

Marijo Jevtic (M)

Institute of Science and Technology Austria, 3400 Klosterneuburg, Austria.

Nobutaka Kurashige (N)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan.

Hirokazu Fuchida (H)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan.

Munetsugu Kido (M)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan.

Kazushi Tani (K)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan.

Naoki Zenmyo (N)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan.

Shohei Uchinomiya (S)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan.

Harumi Harada (H)

Institute of Science and Technology Austria, 3400 Klosterneuburg, Austria.

Makoto Itakura (M)

Department of Biochemistry, Kitasato University School of Medicine, Sagamihara, Kanagawa, Japan.

Itaru Hamachi (I)

Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto, Japan.

Ryuichi Shigemoto (R)

Institute of Science and Technology Austria, 3400 Klosterneuburg, Austria. Electronic address: ryuichi.shigemoto@ist.ac.

Akio Ojida (A)

Graduate School of Pharmaceutical Sciences, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan. Electronic address: ojida@phar.kyushu-u.ac.jp.

Classifications MeSH