Novel and Rare Fusion Transcripts Involving Transcription Factors and Tumor Suppressor Genes in Acute Myeloid Leukemia.

ZEB2-BCL11B acute myeloid leukemia rare fusion genes

Journal

Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829

Informations de publication

Date de publication:
05 Dec 2019
Historique:
received: 16 10 2019
revised: 15 11 2019
accepted: 02 12 2019
entrez: 11 12 2019
pubmed: 11 12 2019
medline: 11 12 2019
Statut: epublish

Résumé

Approximately 18% of acute myeloid leukemia (AML) cases express a fusion transcript. However, few fusions are recurrent across AML and the identification of these rare chimeras is of interest to characterize AML patients. Here, we studied the transcriptome of 8 adult AML patients with poorly described chromosomal translocation(s), with the aim of identifying novel and rare fusion transcripts. We integrated RNA-sequencing data with multiple approaches including computational analysis, Sanger sequencing, fluorescence in situ hybridization and in vitro studies to assess the oncogenic potential of the

Identifiants

pubmed: 31817495
pii: cancers11121951
doi: 10.3390/cancers11121951
pmc: PMC6966504
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : European Hematology Association
ID : EHA Research Fellowship to Giorgia Simonetti
Organisme : Medical Research Council
ID : MR/R009708/1
Pays : United Kingdom
Organisme : Medical Research Council
ID : MC_PC_12009
Pays : United Kingdom
Organisme : Seventh Framework Programme
ID : Grant Agreement n° 306242-NGS-PTL
Organisme : Associazione Italiana per la Ricerca sul Cancro
ID : AIRC-IG n.19226

Déclaration de conflit d'intérêts

GM has competing interests with Incyte, Celgene, Pfizer, Daiichi Sankyo. AS is employed by MLL Munich Leukemia Laboratory. CH has equity ownership of MLL Munich Leukemia Laboratory.

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Auteurs

Antonella Padella (A)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Giorgia Simonetti (G)

Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola (FC), Italy.

Giulia Paciello (G)

Department of Control and Computer Engineering DAUIN, Politecnico di Torino, 10129 Turin, Italy.

George Giotopoulos (G)

Wellcome Trust-Medical Research Council Cambridge Stem Cell Institute, University of Cambridge, Cambridge CB2 1TN, England, UK.
Department of Haematology, Cambridge Institute for Medical Research and Addenbrooke's Hospital, University of Cambridge, Cambridge CB2 0XY, UK.

Carmen Baldazzi (C)

Institute of Hematology "L. and A. Seràgnoli", Sant'Orsola-Malpighi University Hospital, 40138 Bologna, Italy.

Simona Righi (S)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Martina Ghetti (M)

Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola (FC), Italy.

Anna Stengel (A)

MLL-Munich Leukemia Laboratory, 81377 Munich, Germany.

Viviana Guadagnuolo (V)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Rossella De Tommaso (R)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Cristina Papayannidis (C)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Valentina Robustelli (V)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Eugenia Franchini (E)

Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola (FC), Italy.

Andrea Ghelli Luserna di Rorà (AGLD)

Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola (FC), Italy.

Anna Ferrari (A)

Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola (FC), Italy.

Maria Chiara Fontana (MC)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Samantha Bruno (S)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Emanuela Ottaviani (E)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Simona Soverini (S)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Clelia Tiziana Storlazzi (CT)

Department of Biology, University of Bari Aldo Moro, 70125 Bari, Italy.

Claudia Haferlach (C)

MLL-Munich Leukemia Laboratory, 81377 Munich, Germany.

Elena Sabattini (E)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Nicoletta Testoni (N)

Department of Experimental, Diagnostic and Speciality Medicine, University of Bologna, 40138 Bologna, Italy.

Ilaria Iacobucci (I)

Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA.

Brian J P Huntly (BJP)

Wellcome Trust-Medical Research Council Cambridge Stem Cell Institute, University of Cambridge, Cambridge CB2 1TN, England, UK.
Department of Haematology, Cambridge Institute for Medical Research and Addenbrooke's Hospital, University of Cambridge, Cambridge CB2 0XY, UK.

Elisa Ficarra (E)

Department of Control and Computer Engineering DAUIN, Politecnico di Torino, 10129 Turin, Italy.

Giovanni Martinelli (G)

Istituto Scientifico Romagnolo per lo Studio e la Cura dei Tumori (IRST) IRCCS, 47014 Meldola (FC), Italy.

Classifications MeSH