Mutations that prevent caspase cleavage of RIPK1 cause autoinflammatory disease.
Journal
Nature
ISSN: 1476-4687
Titre abrégé: Nature
Pays: England
ID NLM: 0410462
Informations de publication
Date de publication:
01 2020
01 2020
Historique:
received:
05
03
2019
accepted:
17
10
2019
pubmed:
13
12
2019
medline:
9
4
2020
entrez:
13
12
2019
Statut:
ppublish
Résumé
RIPK1 is a key regulator of innate immune signalling pathways. To ensure an optimal inflammatory response, RIPK1 is regulated post-translationally by well-characterized ubiquitylation and phosphorylation events, as well as by caspase-8-mediated cleavage
Identifiants
pubmed: 31827281
doi: 10.1038/s41586-019-1828-5
pii: 10.1038/s41586-019-1828-5
pmc: PMC6930849
mid: EMS84659
doi:
Substances chimiques
RIPK1 protein, human
EC 2.7.11.1
Receptor-Interacting Protein Serine-Threonine Kinases
EC 2.7.11.1
Ripk1 protein, mouse
EC 2.7.11.1
MAP Kinase Kinase Kinases
EC 2.7.11.25
Map3k9 protein, mouse
EC 2.7.11.25
Casp3 protein, mouse
EC 3.4.22.-
Casp8 protein, mouse
EC 3.4.22.-
Caspase 3
EC 3.4.22.-
Caspase 8
EC 3.4.22.-
Types de publication
Journal Article
Research Support, N.I.H., Intramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
103-108Subventions
Organisme : European Research Council
ID : 787826
Pays : International
Organisme : NIAID NIH HHS
ID : R01 AI137249
Pays : United States
Organisme : NHLBI NIH HHS
ID : R01 HL122533
Pays : United States
Références
Bertrand, M. J. M. et al. cIAP1 and cIAP2 facilitate cancer cell survival by functioning as E3 ligases that promote RIP1 ubiquitination. Mol. Cell 30, 689–700 (2008).
pubmed: 18570872
doi: 10.1016/j.molcel.2008.05.014
Dondelinger, Y. et al. MK2 phosphorylation of RIPK1 regulates TNF-mediated cell death. Nat. Cell Biol. 19, 1237–1247 (2017).
pubmed: 28920952
doi: 10.1038/ncb3608
Dondelinger, Y. et al. NF-κB-independent role of IKKα/IKKβ in preventing RIPK1 kinase-dependent apoptotic and necroptotic cell death during TNF signaling. Mol. Cell 60, 63–76 (2015).
pubmed: 26344099
doi: 10.1016/j.molcel.2015.07.032
Jaco, I. et al. MK2 phosphorylates RIPK1 to prevent TNF-induced cell death. Mol. Cell 66, 698–710.e5 (2017).
pubmed: 28506461
pmcid: 5459754
doi: 10.1016/j.molcel.2017.05.003
Feltham, R. et al. Mind bomb regulates cell death during TNF signaling by suppressing RIPK1’s cytotoxic potential. Cell Reports 23, 470–484 (2018).
pubmed: 29642005
doi: 10.1016/j.celrep.2018.03.054
Menon, M. B. et al. p38
pubmed: 28920954
doi: 10.1038/ncb3614
Lafont, E. et al. TBK1 and IKKε prevent TNF-induced cell death by RIPK1 phosphorylation. Nat. Cell Biol. 20, 1389–1399 (2018).
pubmed: 30420664
pmcid: 6268100
doi: 10.1038/s41556-018-0229-6
Oberst, A. et al. Catalytic activity of the caspase-8–FLIP
pubmed: 21368763
pmcid: 3077893
doi: 10.1038/nature09852
Kim, J. W., Choi, E. J. & Joe, C. O. Activation of death-inducing signaling complex (DISC) by pro-apoptotic C-terminal fragment of RIP. Oncogene 19, 4491–4499 (2000).
pubmed: 11002422
doi: 10.1038/sj.onc.1203796
Lin, Y., Devin, A., Rodriguez, Y. & Liu, Z. G. Cleavage of the death domain kinase RIP by caspase-8 prompts TNF-induced apoptosis. Genes Dev. 13, 2514–2526 (1999).
pubmed: 10521396
pmcid: 317073
doi: 10.1101/gad.13.19.2514
van Raam, B. J., Ehrnhoefer, D. E., Hayden, M. R. & Salvesen, G. S. Intrinsic cleavage of receptor-interacting protein kinase-1 by caspase-6. Cell Death Differ. 20, 86–96 (2013).
pubmed: 22858542
doi: 10.1038/cdd.2012.98
Dillon, C. P. et al. RIPK1 blocks early postnatal lethality mediated by caspase-8 and RIPK3. Cell 157, 1189–1202 (2014).
pubmed: 24813850
pmcid: 4068710
doi: 10.1016/j.cell.2014.04.018
Kaiser, W. J. et al. RIP1 suppresses innate immune necrotic as well as apoptotic cell death during mammalian parturition. Proc. Natl Acad. Sci. USA 111, 7753–7758 (2014).
pubmed: 24821786
doi: 10.1073/pnas.1401857111
pmcid: 4040608
Kelliher, M. A. et al. The death domain kinase RIP mediates the TNF-induced NF-κB signal. Immunity 8, 297–303 (1998).
pubmed: 9529147
doi: 10.1016/S1074-7613(00)80535-X
Rickard, J. A. et al. RIPK1 regulates RIPK3-MLKL-driven systemic inflammation and emergency hematopoiesis. Cell 157, 1175–1188 (2014).
pubmed: 24813849
doi: 10.1016/j.cell.2014.04.019
Moulin, M. et al. IAPs limit activation of RIP kinases by TNF receptor 1 during development. EMBO J. 31, 1679–1691 (2012).
pubmed: 22327219
pmcid: 3321198
doi: 10.1038/emboj.2012.18
Peltzer, N. et al. LUBAC is essential for embryogenesis by preventing cell death and enabling haematopoiesis. Nature 557, 112–117 (2018).
pubmed: 29695863
pmcid: 5947819
doi: 10.1038/s41586-018-0064-8
Peltzer, N. et al. HOIP deficiency causes embryonic lethality by aberrant TNFR1-mediated endothelial cell death. Cell Reports 9, 153–165 (2014).
pubmed: 25284787
doi: 10.1016/j.celrep.2014.08.066
Varfolomeev, E. E. et al. Targeted disruption of the mouse Caspase 8 gene ablates cell death induction by the TNF receptors, Fas/Apo1, and DR3 and is lethal prenatally. Immunity 9, 267–276 (1998).
pubmed: 9729047
doi: 10.1016/S1074-7613(00)80609-3
Yeh, W. C. et al. FADD: essential for embryo development and signaling from some, but not all, inducers of apoptosis. Science 279, 1954–1958 (1998).
pubmed: 9506948
doi: 10.1126/science.279.5358.1954
Yeh, W. C. et al. Requirement for Casper (c-FLIP) in regulation of death receptor-induced apoptosis and embryonic development. Immunity 12, 633–642 (2000).
pubmed: 10894163
doi: 10.1016/S1074-7613(00)80214-9
Kaiser, W. J. et al. RIP3 mediates the embryonic lethality of caspase-8-deficient mice. Nature 471, 368–372 (2011).
pubmed: 21368762
pmcid: 3060292
doi: 10.1038/nature09857
Alvarez-Diaz, S. et al. The pseudokinase MLKL and the kinase RIPK3 have distinct roles in autoimmune disease caused by loss of death-receptor-induced apoptosis. Immunity 45, 513–526 (2016).
pubmed: 27523270
pmcid: 5040700
doi: 10.1016/j.immuni.2016.07.016
Zhang, X., Dowling, J. P. & Zhang, J. RIPK1 can mediate apoptosis in addition to necroptosis during embryonic development. Cell Death Dis. 10, 245 (2019).
pubmed: 30867408
pmcid: 6416317
doi: 10.1038/s41419-019-1490-8
Dondelinger, Y. et al. Serine 25 phosphorylation inhibits RIPK1 kinase-dependent cell death in models of infection and inflammation. Nat. Commun. 10, 1729 (2019).
pubmed: 30988283
pmcid: 6465317
doi: 10.1038/s41467-019-09690-0
Geng, J. et al. Regulation of RIPK1 activation by TAK1-mediated phosphorylation dictates apoptosis and necroptosis. Nat. Commun. 8, 359 (2017).
pubmed: 28842570
pmcid: 5572456
doi: 10.1038/s41467-017-00406-w
Stennicke, H. R. & Salvesen, G. S. Catalytic properties of the caspases. Cell Death Differ. 6, 1054–1059 (1999).
pubmed: 10578173
doi: 10.1038/sj.cdd.4400599
Wong, W. W. et al. RIPK1 is not essential for TNFR1-induced activation of NF-κB. Cell Death Differ. 17, 482–487 (2010).
pubmed: 19927158
doi: 10.1038/cdd.2009.178
Newton, K. et al. RIPK1 inhibits ZBP1-driven necroptosis during development. Nature 540, 129–133 (2016).
pubmed: 27819682
doi: 10.1038/nature20559
Cuchet-Lourenço, D. et al. Biallelic RIPK1 mutations in humans cause severe immunodeficiency, arthritis, and intestinal inflammation. Science 361, 810–813 (2018).
pubmed: 30026316
pmcid: 6529353
doi: 10.1126/science.aar2641
Micheau, O., Lens, S., Gaide, O., Alevizopoulos, K. & Tschopp, J. NF-kappaB signals induce the expression of c-FLIP. Mol. Cell. Biol. 21, 5299–5305 (2001).
pubmed: 11463813
pmcid: 87253
doi: 10.1128/MCB.21.16.5299-5305.2001
Croft, S. N., Walker, E. J. & Ghildyal, R. Human Rhinovirus 3C protease cleaves RIPK1, concurrent with caspase 8 activation. Sci. Rep. 8, 1569 (2018).
pubmed: 29371673
pmcid: 5785518
doi: 10.1038/s41598-018-19839-4
Pearson, J. S. et al. EspL is a bacterial cysteine protease effector that cleaves RHIM proteins to block necroptosis and inflammation. Nat. Microbiol. 2, 16258 (2017).
pubmed: 28085133
doi: 10.1038/nmicrobiol.2016.258
Kim, D., Langmead, B. & Salzberg, S. L. HISAT: a fast spliced aligner with low memory requirements. Nat. Methods 12, 357–360 (2015).
pubmed: 25751142
pmcid: 4655817
doi: 10.1038/nmeth.3317
Anders, S., Pyl, P. T. & Huber, W. HTSeq—a Python framework to work with high-throughput sequencing data. Bioinformatics 31, 166–169 (2015).
doi: 10.1093/bioinformatics/btu638
pubmed: 25260700
Huang, W., Sherman, B. T. & Lempicki, R. A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protocols 4, 44–57 (2009).
doi: 10.1038/nprot.2008.211
Sun, J., Nishiyama, T., Shimizu, K. & Kadota, K. TCC: an R package for comparing tag count data with robust normalization strategies. BMC Bioinformatics 14, 219 (2013).
pubmed: 23837715
pmcid: 3716788
doi: 10.1186/1471-2105-14-219
Robinson, M. D., McCarthy, D. J. & Smyth, G. K. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26, 139–140 (2010).
pubmed: 19910308
doi: 10.1093/bioinformatics/btp616
Newton, K., Sun, X. & Dixit, V. M. Kinase RIP3 is dispensable for normal NF-κBs, signaling by the B-cell and T-cell receptors, tumor necrosis factor receptor 1, and Toll-like receptors 2 and 4. Mol. Cell. Biol. 24, 1464–1469 (2004).
pubmed: 14749364
pmcid: 344190
doi: 10.1128/MCB.24.4.1464-1469.2004
Murphy, J. M. et al. The pseudokinase MLKL mediates necroptosis via a molecular switch mechanism. Immunity 39, 443–453 (2013).
pubmed: 24012422
doi: 10.1016/j.immuni.2013.06.018
Conos, S. A., Lawlor, K. E., Vaux, D. L., Vince, J. E. & Lindqvist, L. M. Cell death is not essential for caspase-1-mediated interleukin-1β activation and secretion. Cell Death Differ. 23, 1827–1838 (2016).
pubmed: 27419363
pmcid: 5071572
doi: 10.1038/cdd.2016.69
Mandal, P. et al. RIP3 induces apoptosis independent of pronecrotic kinase activity. Mol. Cell 56, 481–495 (2014).
pubmed: 25459880
pmcid: 4512186
doi: 10.1016/j.molcel.2014.10.021
Newton, K. et al. Activity of protein kinase RIPK3 determines whether cells die by necroptosis or apoptosis. Science 343, 1357–1360 (2014).
pubmed: 24557836
doi: 10.1126/science.1249361