Kidney edge detection in laparoscopic image data for computer-assisted surgery : Kidney edge detection.


Journal

International journal of computer assisted radiology and surgery
ISSN: 1861-6429
Titre abrégé: Int J Comput Assist Radiol Surg
Pays: Germany
ID NLM: 101499225

Informations de publication

Date de publication:
Mar 2020
Historique:
received: 06 08 2019
accepted: 02 12 2019
pubmed: 13 12 2019
medline: 12 9 2020
entrez: 13 12 2019
Statut: ppublish

Résumé

In robotic-assisted kidney surgery, computational methods make it possible to augment the surgical scene and potentially improve patient outcome. Most often, soft-tissue registration is a prerequisite for the visualization of tumors and vascular structures hidden beneath the surface. State-of-the-art volume-to-surface registration methods, however, are computationally demanding and require a sufficiently large target surface. To overcome this limitation, the first step toward registration is the extraction of the outer edge of the kidney. To tackle this task, we propose a deep learning-based solution. Rather than working only on the raw laparoscopic images, the network is given depth information and distance fields to predict whether a pixel of the image belongs to an edge. We evaluate our method on expert-labeled in vivo data from the EndoVis sub-challenge 2017 Kidney Boundary Detection and define the current state of the art. By using a leave-one-out cross-validation, we report results for the most suitable network with a median precision-like, recall-like, and intersection over union (IOU) of 39.5 px, 143.3 px, and 0.3, respectively. We conclude that our approach succeeds in predicting the edges of the kidney, except in instances where high occlusion occurs, which explains the average decrease in the IOU score. All source code, reference data, models, and evaluation results are openly available for download: https://github.com/ghattab/kidney-edge-detection/.

Identifiants

pubmed: 31828502
doi: 10.1007/s11548-019-02102-0
pii: 10.1007/s11548-019-02102-0
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

379-387

Subventions

Organisme : Bundesministerium für Wirtschaft und Energie
ID : OP4.1 Initiative

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Auteurs

Georges Hattab (G)

Division of Translational Surgical Oncology (TSO), National Center for Tumor Diseases (NCT), Fetcherstr. 74, 01307, Dresden, Germany. georges.hattab@nct-dresden.de.

Marvin Arnold (M)

Division of Translational Surgical Oncology (TSO), National Center for Tumor Diseases (NCT), Fetcherstr. 74, 01307, Dresden, Germany.

Leon Strenger (L)

Division of Translational Surgical Oncology (TSO), National Center for Tumor Diseases (NCT), Fetcherstr. 74, 01307, Dresden, Germany.

Max Allan (M)

Intuitive Surgical Inc., 5301, 1020 Kifer Rd, Sunnyvale, CA, 94086, USA.

Darja Arsentjeva (D)

Division of Translational Surgical Oncology (TSO), National Center for Tumor Diseases (NCT), Fetcherstr. 74, 01307, Dresden, Germany.

Oliver Gold (O)

Division of Translational Surgical Oncology (TSO), National Center for Tumor Diseases (NCT), Fetcherstr. 74, 01307, Dresden, Germany.

Tobias Simpfendörfer (T)

Department of Urology, Heidelberg University Hospital, Im Neuenheimer Feld 110, 69120, Heidelberg, Germany.

Lena Maier-Hein (L)

Division of Computer Assisted Medical Interventions (CAMI), German Cancer Research Center (DKFZ), Im Neuenheimer Feld 581, 69120, Heidelberg, Germany.

Stefanie Speidel (S)

Division of Translational Surgical Oncology (TSO), National Center for Tumor Diseases (NCT), Fetcherstr. 74, 01307, Dresden, Germany.

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