Molecular subgrouping of atypical teratoid/rhabdoid tumors-a reinvestigation and current consensus.


Journal

Neuro-oncology
ISSN: 1523-5866
Titre abrégé: Neuro Oncol
Pays: England
ID NLM: 100887420

Informations de publication

Date de publication:
15 05 2020
Historique:
pubmed: 1 1 2020
medline: 28 4 2021
entrez: 1 1 2020
Statut: ppublish

Résumé

Atypical teratoid/rhabdoid tumors (ATRTs) are known to exhibit molecular and clinical heterogeneity even though SMARCB1 inactivation is the sole recurrent genetic event present in nearly all cases. Indeed, recent studies demonstrated 3 molecular subgroups of ATRTs that are genetically, epigenetically, and clinically distinct. As these studies included different numbers of tumors, various subgrouping techniques, and naming, an international working group sought to align previous findings and to reach a consensus on nomenclature and clinicopathological significance of ATRT subgroups. We integrated various methods to perform a meta-analysis on published and unpublished DNA methylation and gene expression datasets of ATRTs and associated clinicopathological data. In concordance with previous studies, the analyses identified 3 main molecular subgroups of ATRTs, for which a consensus was reached to name them ATRT-TYR, ATRT-SHH, and ATRT-MYC. The ATRT-SHH subgroup exhibited further heterogeneity, segregating further into 2 subtypes associated with a predominant supratentorial (ATRT-SHH-1) or infratentorial (ATRT-SHH-2) location. For each ATRT subgroup we provide an overview of its main molecular and clinical characteristics, including SMARCB1 alterations and pathway activation. The introduction of a common classification, characterization, and nomenclature of ATRT subgroups will facilitate future research and serve as a common ground for subgrouping patient samples and ATRT models, which will aid in refining subgroup-based therapies for ATRT patients.

Sections du résumé

BACKGROUND
Atypical teratoid/rhabdoid tumors (ATRTs) are known to exhibit molecular and clinical heterogeneity even though SMARCB1 inactivation is the sole recurrent genetic event present in nearly all cases. Indeed, recent studies demonstrated 3 molecular subgroups of ATRTs that are genetically, epigenetically, and clinically distinct. As these studies included different numbers of tumors, various subgrouping techniques, and naming, an international working group sought to align previous findings and to reach a consensus on nomenclature and clinicopathological significance of ATRT subgroups.
METHODS
We integrated various methods to perform a meta-analysis on published and unpublished DNA methylation and gene expression datasets of ATRTs and associated clinicopathological data.
RESULTS
In concordance with previous studies, the analyses identified 3 main molecular subgroups of ATRTs, for which a consensus was reached to name them ATRT-TYR, ATRT-SHH, and ATRT-MYC. The ATRT-SHH subgroup exhibited further heterogeneity, segregating further into 2 subtypes associated with a predominant supratentorial (ATRT-SHH-1) or infratentorial (ATRT-SHH-2) location. For each ATRT subgroup we provide an overview of its main molecular and clinical characteristics, including SMARCB1 alterations and pathway activation.
CONCLUSIONS
The introduction of a common classification, characterization, and nomenclature of ATRT subgroups will facilitate future research and serve as a common ground for subgrouping patient samples and ATRT models, which will aid in refining subgroup-based therapies for ATRT patients.

Identifiants

pubmed: 31889194
pii: 5691191
doi: 10.1093/neuonc/noz235
pmc: PMC7229260
doi:

Types de publication

Journal Article Meta-Analysis Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

613-624

Subventions

Organisme : CIHR
ID : 409302
Pays : Canada
Organisme : Cancer Research UK
Pays : United Kingdom

Commentaires et corrections

Type : ErratumIn

Informations de copyright

© The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Neuro-Oncology.

Références

Acta Neuropathol. 2018 Aug;136(2):227-237
pubmed: 30019219
Cancer Cell. 2017 Jun 12;31(6):737-754.e6
pubmed: 28609654
Nat Commun. 2017 Aug 21;8(1):300
pubmed: 28824165
Acta Neuropathol. 2014 Sep;128(3):453-6
pubmed: 25060813
Cell Rep. 2019 Aug 27;28(9):2331-2344.e8
pubmed: 31461650
Cell Rep. 2019 Nov 19;29(8):2338-2354.e7
pubmed: 31708418
Front Oncol. 2012 Sep 12;2:114
pubmed: 22988546
Cell Rep. 2016 Oct 25;17(5):1265-1275
pubmed: 27783942
Neuro Oncol. 2016 Jun;18(6):764-78
pubmed: 26755072
Neuropathol Appl Neurobiol. 2020 Feb;46(2):186-189
pubmed: 31077608
Cell Rep. 2017 Nov 14;21(7):1737-1745
pubmed: 29141209
Int J Cancer. 2014 Aug 15;135(4):989-95
pubmed: 24420698
Dev Dyn. 1996 Apr;205(4):445-56
pubmed: 8901055
Lancet Oncol. 2015 May;16(5):569-82
pubmed: 25882982
Nat Med. 2010 Dec;16(12):1429-33
pubmed: 21076395
Acta Neuropathol. 2017 Jan;133(1):5-12
pubmed: 27858204
Lancet Oncol. 2017 Jul;18(7):958-971
pubmed: 28545823
J Neuropathol Exp Neurol. 2015 Feb;74(2):177-85
pubmed: 25575139
Cancer Cell. 2012 Oct 16;22(4):425-37
pubmed: 23079654
Nature. 2018 Mar 22;555(7697):469-474
pubmed: 29539639
Mol Cancer Ther. 2014 Apr;13(4):842-54
pubmed: 24563539
Eur J Haematol. 2015 Jun;94(6):554-7
pubmed: 24913471
Acta Neuropathol. 2012 Apr;123(4):465-72
pubmed: 22134537
Nat Commun. 2016 Jan 28;7:10421
pubmed: 26818002
Neuro Oncol. 2016 Nov;18(11):1519-1528
pubmed: 27370397
Cancer Cell. 2019 Jan 14;35(1):95-110.e8
pubmed: 30595504
Am J Hum Genet. 2010 Feb 12;86(2):279-84
pubmed: 20137775
Cancer Res. 2015 Nov 1;75(21):4629-39
pubmed: 26363008
Development. 2015 Jan 15;142(2):242-57
pubmed: 25564621
Nat Med. 2018 Nov;24(11):1752-1761
pubmed: 30349086
Cancer Cell. 2016 Mar 14;29(3):379-393
pubmed: 26923874
Acta Neuropathol. 2018 Aug;136(2):315-326
pubmed: 29428974
Neuro Oncol. 2018 Nov 12;20(12):1672-1679
pubmed: 30010851
Neuro Oncol. 2011 Dec;13(12):1296-307
pubmed: 21946044
Brain Pathol. 2017 Jul;27(4):411-418
pubmed: 27380723
Acta Neuropathol. 2019 Aug;138(2):309-326
pubmed: 31076851
Cancer Cell. 2016 Dec 12;30(6):891-908
pubmed: 27960086

Auteurs

Ben Ho (B)

Division of Hematology and Oncology, Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, Ontario, Canada.

Pascal D Johann (PD)

Hopp Children's Cancer Center, Heidelberg, Germany.
Division of Pediatric Neuro-oncology, German Cancer Research Center and German Cancer Research Consortium, Heidelberg, Germany.
Department of Pediatric Hematology and Oncology, University Hospital Heidelberg, Heidelberg, Germany.

Yura Grabovska (Y)

Wolfson Childhood Cancer Research Centre, Northern Institute for Cancer Research, Newcastle University, Newcastle upon Tyne, UK.

Mamy Jean De Dieu Andrianteranagna (MJ)

Departments of Genetics and of Oncopediatry and Young Adults, Curie Institute, Paris, France.
INSERM U830, Laboratory of Translational Research in Pediatric Oncology, SIREDO Pediatric Oncology Center, Curie Institute, Paris, France.

Fupan Yao (F)

Department of Medical Biophysics, Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada.

Michael Frühwald (M)

University Children's Hospital Augsburg, Swabian Children's Cancer Center, Augsburg, Germany.

Martin Hasselblatt (M)

Institute of Neuropathology, University Hospital Münster, Münster, Germany.

Franck Bourdeaut (F)

Departments of Genetics and of Oncopediatry and Young Adults, Curie Institute, Paris, France.
INSERM U830, Laboratory of Translational Research in Pediatric Oncology, SIREDO Pediatric Oncology Center, Curie Institute, Paris, France.

Daniel Williamson (D)

Wolfson Childhood Cancer Research Centre, Northern Institute for Cancer Research, Newcastle University, Newcastle upon Tyne, UK.

Annie Huang (A)

Division of Hematology and Oncology, Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, Ontario, Canada.

Marcel Kool (M)

Hopp Children's Cancer Center, Heidelberg, Germany.
Division of Pediatric Neuro-oncology, German Cancer Research Center and German Cancer Research Consortium, Heidelberg, Germany.

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