Phylogenomic Analysis of Two Co-Circulating Canine Distemper Virus Lineages in Colombia.
genome CDV
lineages co-circulation
phylogenomics
reemerging
Journal
Pathogens (Basel, Switzerland)
ISSN: 2076-0817
Titre abrégé: Pathogens
Pays: Switzerland
ID NLM: 101596317
Informations de publication
Date de publication:
27 Dec 2019
27 Dec 2019
Historique:
received:
28
11
2019
revised:
16
12
2019
accepted:
18
12
2019
entrez:
2
1
2020
pubmed:
2
1
2020
medline:
2
1
2020
Statut:
epublish
Résumé
Canine distemper virus (CDV) is considered a reemerging disease-causing agent in domestic dogs because it presents high divergence among circulating strains worldwide. In Colombia, the South America-3 and South America/North America-4 lineages co-circulate in domestic dogs, both in the Medellin metropolitan area. In this paper, two full CDV genomes from each viral lineage circulating in Medellin were sequenced; we explored the phylogenetic relationship with the available genome sequences; we described the presence of CDV mutations in the South America-3 and South America/North America-4 lineages associated with adaptation to human cells and a crossing of the species barrier and pathogenicity; and we established the evolutionary rates and time of the closest common ancestor for each gene and characterized the presentation of multiple genomic sites by positive selection.
Identifiants
pubmed: 31892101
pii: pathogens9010026
doi: 10.3390/pathogens9010026
pmc: PMC7168600
pii:
doi:
Types de publication
Journal Article
Langues
eng
Subventions
Organisme : Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)
ID : 123171249669
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