GANPOP: Generative Adversarial Network Prediction of Optical Properties From Single Snapshot Wide-Field Images.


Journal

IEEE transactions on medical imaging
ISSN: 1558-254X
Titre abrégé: IEEE Trans Med Imaging
Pays: United States
ID NLM: 8310780

Informations de publication

Date de publication:
06 2020
Historique:
pubmed: 4 1 2020
medline: 25 6 2021
entrez: 4 1 2020
Statut: ppublish

Résumé

We present a deep learning framework for wide-field, content-aware estimation of absorption and scattering coefficients of tissues, called Generative Adversarial Network Prediction of Optical Properties (GANPOP). Spatial frequency domain imaging is used to obtain ground-truth optical properties at 660 nm from in vivo human hands and feet, freshly resected human esophagectomy samples, and homogeneous tissue phantoms. Images of objects with either flat-field or structured illumination are paired with registered optical property maps and are used to train conditional generative adversarial networks that estimate optical properties from a single input image. We benchmark this approach by comparing GANPOP to a single-snapshot optical property (SSOP) technique, using a normalized mean absolute error (NMAE) metric. In human gastrointestinal specimens, GANPOP with a single structured-light input image estimates the reduced scattering and absorption coefficients with 60% higher accuracy than SSOP while GANPOP with a single flat-field illumination image achieves similar accuracy to SSOP. When applied to both in vivo and ex vivo swine tissues, a GANPOP model trained solely on structured-illumination images of human specimens and phantoms estimates optical properties with approximately 46% improvement over SSOP, indicating adaptability to new, unseen tissue types. Given a training set that appropriately spans the target domain, GANPOP has the potential to enable rapid and accurate wide-field measurements of optical properties.

Identifiants

pubmed: 31899416
doi: 10.1109/TMI.2019.2962786
pmc: PMC8314791
mid: NIHMS1722905
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

1988-1999

Subventions

Organisme : NIBIB NIH HHS
ID : R21 EB024700
Pays : United States

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