Evolutionarily conserved pachytene piRNA loci are highly divergent among modern humans.


Journal

Nature ecology & evolution
ISSN: 2397-334X
Titre abrégé: Nat Ecol Evol
Pays: England
ID NLM: 101698577

Informations de publication

Date de publication:
01 2020
Historique:
received: 10 07 2019
accepted: 19 11 2019
entrez: 5 1 2020
pubmed: 5 1 2020
medline: 31 3 2020
Statut: ppublish

Résumé

In the fetal mouse testis, PIWI-interacting RNAs (piRNAs) guide PIWI proteins to silence transposons but, after birth, most post-pubertal pachytene piRNAs map to the genome uniquely and are thought to regulate genes required for male fertility. In the human male, the developmental classes, precise genomic origins and transcriptional regulation of postnatal piRNAs remain undefined. Here, we demarcate the genes and transcripts that produce postnatal piRNAs in human juvenile and adult testes. As in the mouse, human A-MYB drives transcription of both pachytene piRNA precursor transcripts and messenger RNAs encoding piRNA biogenesis factors. Although human piRNA genes are syntenic to those in other placental mammals, their sequences are poorly conserved. In fact, pachytene piRNA loci are rapidly diverging even among modern humans. Our findings suggest that, during mammalian evolution, pachytene piRNA genes are under few selective constraints. We speculate that pachytene piRNA diversity may provide a hitherto unrecognized driver of reproductive isolation.

Identifiants

pubmed: 31900453
doi: 10.1038/s41559-019-1065-1
pii: 10.1038/s41559-019-1065-1
pmc: PMC6961462
mid: NIHMS1544104
doi:

Substances chimiques

RNA, Messenger 0
RNA, Small Interfering 0

Types de publication

Journal Article Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

156-168

Subventions

Organisme : Howard Hughes Medical Institute
Pays : United States
Organisme : NICHD NIH HHS
ID : P01 HD078253
Pays : United States
Organisme : NIGMS NIH HHS
ID : R37 GM062862
Pays : United States
Organisme : NCATS NIH HHS
ID : UL1 TR001453
Pays : United States

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Auteurs

Deniz M Özata (DM)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA.

Tianxiong Yu (T)

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA.
Department of Bioinformatics, School of Life Sciences and Technology, Tongji University, Shanghai, People's Republic of China.

Haiwei Mou (H)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA.

Ildar Gainetdinov (I)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA.

Cansu Colpan (C)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA.

Katharine Cecchini (K)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA.
Howard Hughes Medical Institute, University of Massachusetts Medical School, Worcester, MA, USA.

Yasin Kaymaz (Y)

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA.

Pei-Hsuan Wu (PH)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA.

Kaili Fan (K)

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA.
Department of Bioinformatics, School of Life Sciences and Technology, Tongji University, Shanghai, People's Republic of China.

Alper Kucukural (A)

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA.

Zhiping Weng (Z)

Program in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, MA, USA. zhiping.weng@umassmed.edu.

Phillip D Zamore (PD)

RNA Therapeutics Institute, University of Massachusetts Medical School, Worcester, MA, USA. phillip.zamore@umassmed.edu.
Howard Hughes Medical Institute, University of Massachusetts Medical School, Worcester, MA, USA. phillip.zamore@umassmed.edu.

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