Cotranslational Folding of Proteins on the Ribosome.


Journal

Biomolecules
ISSN: 2218-273X
Titre abrégé: Biomolecules
Pays: Switzerland
ID NLM: 101596414

Informations de publication

Date de publication:
07 01 2020
Historique:
received: 05 12 2019
revised: 20 12 2019
accepted: 25 12 2019
entrez: 16 1 2020
pubmed: 16 1 2020
medline: 1 4 2021
Statut: epublish

Résumé

Many proteins in the cell fold cotranslationally within the restricted space of the polypeptide exit tunnel or at the surface of the ribosome. A growing body of evidence suggests that the ribosome can alter the folding trajectory in many different ways. In this review, we summarize the recent examples of how translation affects folding of single-domain, multiple-domain and oligomeric proteins. The vectorial nature of translation, the spatial constraints of the exit tunnel, and the electrostatic properties of the ribosome-nascent peptide complex define the onset of early folding events. The ribosome can facilitate protein compaction, induce the formation of intermediates that are not observed in solution, or delay the onset of folding. Examples of single-domain proteins suggest that early compaction events can define the folding pathway for some types of domain structures. Folding of multi-domain proteins proceeds in a domain-wise fashion, with each domain having its role in stabilizing or destabilizing neighboring domains. Finally, the assembly of protein complexes can also begin cotranslationally. In all these cases, the ribosome helps the nascent protein to attain a native fold and avoid the kinetic traps of misfolding.

Identifiants

pubmed: 31936054
pii: biom10010097
doi: 10.3390/biom10010097
pmc: PMC7023365
pii:
doi:

Substances chimiques

Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : European Research Council
ID : n° 787926
Pays : International
Organisme : Max-Planck-Gesellschaft
ID : n/a
Pays : International

Références

Sci Adv. 2016 Aug 19;2(8):e1600379
pubmed: 27551685
Mol Cell. 2019 Apr 4;74(1):73-87.e8
pubmed: 30876805
Science. 2015 Nov 27;350(6264):1104-7
pubmed: 26612953
Biochemistry. 2005 Jun 14;44(23):8230-43
pubmed: 15938612
PLoS Comput Biol. 2010 Oct 21;6(10):e1000963
pubmed: 20975935
Proc Natl Acad Sci U S A. 2016 Feb 2;113(5):1232-7
pubmed: 26787848
J Mol Biol. 2018 Dec 7;430(24):5207-5216
pubmed: 30365950
Curr Opin Struct Biol. 2016 Apr;37:123-33
pubmed: 26859868
Proc Natl Acad Sci U S A. 2017 May 30;114(22):E4399-E4407
pubmed: 28507157
Adv Protein Chem. 1990;40:63-279
pubmed: 2195851
Biochem Soc Trans. 2018 Feb 19;46(1):197-206
pubmed: 29432142
Trends Biochem Sci. 2013 Aug;38(8):378-85
pubmed: 23768628
Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):25641-25648
pubmed: 31776255
J Mol Biol. 2008 Dec 5;384(1):73-86
pubmed: 18822297
Prog Retin Eye Res. 2018 Jan;62:1-23
pubmed: 29042326
J Biol Chem. 2019 Feb 8;294(6):2076-2084
pubmed: 30504455
Cell Rep. 2014 Oct 23;9(2):469-75
pubmed: 25310980
J Am Chem Soc. 2011 Jan 26;133(3):513-26
pubmed: 21204555
Science. 2006 Sep 29;313(5795):1935-42
pubmed: 16959973
EMBO J. 1994 Aug 1;13(15):3631-7
pubmed: 8062837
Biophys J. 2018 Sep 18;115(6):996-1006
pubmed: 30173887
J Mol Biol. 2006 Jul 21;360(4):893-906
pubmed: 16784753
Mol Cell. 2016 Feb 4;61(3):341-351
pubmed: 26849192
Science. 2011 Dec 23;334(6063):1723-7
pubmed: 22194581
Mol Cell. 2010 Oct 8;40(1):138-46
pubmed: 20932481
Protein Sci. 2017 Jul;26(7):1439-1451
pubmed: 28474852
PLoS Genet. 2011 Dec;7(12):e1002398
pubmed: 22144913
Trends Biochem Sci. 2009 Jan;34(1):16-24
pubmed: 18996013
Cell Rep. 2015 Sep 8;12(10):1533-40
pubmed: 26321634
Annu Rev Biochem. 2014;83:553-84
pubmed: 24606139
Science. 2015 Apr 24;348(6233):444-8
pubmed: 25908822
J Biol Chem. 2000 Jun 2;275(22):16597-601
pubmed: 10748063
Proc Natl Acad Sci U S A. 2019 Mar 19;116(12):5523-5532
pubmed: 30824598
Nat Struct Biol. 1999 Jul;6(7):697-705
pubmed: 10404229
Biochemistry. 2018 Jun 26;57(25):3460-3464
pubmed: 29741886
J Am Chem Soc. 2010 Dec 1;132(47):16928-37
pubmed: 21062068
J Mol Biol. 2008 Nov 14;383(3):683-92
pubmed: 18674543
Mol Cell. 2019 Apr 18;74(2):310-319.e7
pubmed: 30852061
Science. 2005 Nov 4;310(5749):827-34
pubmed: 16272117
J Mol Biol. 1967 Jun 14;26(2):329-46
pubmed: 4962271
Cell. 2011 Nov 11;147(4):789-802
pubmed: 22056041
Arq Bras Oftalmol. 2011 Mar-Apr;74(2):136-42
pubmed: 21779674
Sci Adv. 2017 Jun 07;3(6):e1700147
pubmed: 28630923
Nucleic Acids Res. 2019 May 7;47(8):4198-4210
pubmed: 30805621
Curr Opin Struct Biol. 2007 Feb;17(1):30-7
pubmed: 17239580
J Mol Biol. 2007 Aug 31;371(5):1378-91
pubmed: 17631312
Proc Natl Acad Sci U S A. 2004 May 25;101(21):7976-81
pubmed: 15150406
Elife. 2017 May 30;6:
pubmed: 28556777
Nat Struct Mol Biol. 2010 Mar;17(3):313-7
pubmed: 20139981
EMBO J. 2009 Oct 7;28(19):2959-70
pubmed: 19713935
Sci Rep. 2016 Oct 04;6:34654
pubmed: 27698466
Trends Cell Biol. 2019 Oct;29(10):791-803
pubmed: 31427208
Annu Rev Biochem. 2013;82:171-202
pubmed: 23746254
Neuron. 2004 Oct 14;44(2):295-307
pubmed: 15473968
Proc Natl Acad Sci U S A. 2018 Nov 27;115(48):E11284-E11293
pubmed: 30413621
J Chem Phys. 2013 Jun 7;138(21):215101
pubmed: 23758397
Science. 1973 Jul 20;181(4096):223-30
pubmed: 4124164
J Phys Chem B. 2018 Nov 1;122(43):9927-9937
pubmed: 30265800
J Biol Chem. 2012 Jan 20;287(4):2568-78
pubmed: 22128180
Proc Natl Acad Sci U S A. 2012 Jul 31;109(31):12467-72
pubmed: 22802618
Nat Rev Genet. 2015 Jan;16(1):45-56
pubmed: 25404111
Elife. 2015 Dec 14;4:
pubmed: 26670735
Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):E132-40
pubmed: 23256155
Nat Commun. 2015 Apr 23;6:6941
pubmed: 25903689
Nature. 2018 Sep;561(7722):268-272
pubmed: 30158700
J Mol Biol. 2019 Mar 15;431(6):1308-1314
pubmed: 30738895
Science. 2016 Jul 1;353(6294):aac4354
pubmed: 27365453
Nat Commun. 2019 Apr 15;10(1):1740
pubmed: 30988355
Nucleic Acids Res. 2017 Feb 17;45(3):1186-1199
pubmed: 28180299
Sci Rep. 2019 Jun 10;9(1):8426
pubmed: 31182755
Nat Struct Mol Biol. 2017 Mar;24(3):221-225
pubmed: 28112730
Acc Chem Res. 2014 May 20;47(5):1536-44
pubmed: 24784899
Nat Struct Mol Biol. 2005 Dec;12(12):1123-9
pubmed: 16299515
Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):E9280-E9287
pubmed: 30224455
Elife. 2018 Nov 26;7:
pubmed: 30475203
Nat Commun. 2018 Dec 7;9(1):5246
pubmed: 30531789
Annu Rev Biochem. 2019 Jun 20;88:337-364
pubmed: 30508494
Mob Genet Elements. 2013 Sep 1;3(5):e26219
pubmed: 24251069
Nucleic Acids Res. 2020 Feb 20;48(3):1043-1055
pubmed: 31598688
RNA Biol. 2016 Jun 2;13(6):561-8
pubmed: 27064519
J Biol Chem. 1986 Oct 15;261(29):13800-6
pubmed: 3020051
Mol Cell. 2011 Mar 18;41(6):682-92
pubmed: 21419343
J Mol Biol. 2015 Apr 10;427(7):1564-74
pubmed: 25681695
J Phys Chem B. 2018 Dec 13;122(49):11616-11625
pubmed: 30198720
Proc Natl Acad Sci U S A. 2013 Jan 2;110(1):147-50
pubmed: 23251035
Mol Cell. 2005 Oct 28;20(2):277-87
pubmed: 16246729
Arch Biochem Biophys. 2008 Jan 1;469(1):4-19
pubmed: 17585870
Nat Struct Mol Biol. 2009 Apr;16(4):405-11
pubmed: 19270700
Science. 2000 Aug 11;289(5481):920-30
pubmed: 10937990
Transl Neurodegener. 2017 Mar 13;6:6
pubmed: 28293421
Mol Cell. 2019 Apr 4;74(1):88-100.e9
pubmed: 30876804
J Mol Biol. 2004 Nov 12;344(1):195-205
pubmed: 15504411
Proc Natl Acad Sci U S A. 2018 Sep 25;115(39):9744-9749
pubmed: 30201720
Proc Natl Acad Sci U S A. 2018 Nov 27;115(48):12206-12211
pubmed: 30409803
Biochem J. 1976 Nov 15;160(2):185-94
pubmed: 795428
Proc Natl Acad Sci U S A. 2016 May 3;113(18):5012-7
pubmed: 27092002
ACS Chem Biol. 2013;8(6):1195-204
pubmed: 23517476
Mol Cell. 2010 Jun 25;38(6):916-28
pubmed: 20620961
Nat Commun. 2019 Jun 20;10(1):2709
pubmed: 31221966
Annu Rev Biochem. 2017 Jun 20;86:21-26
pubmed: 28441058
Nat Struct Mol Biol. 2016 Apr;23(4):278-285
pubmed: 26926436
Proc Natl Acad Sci U S A. 2010 May 18;107(20):9111-6
pubmed: 20439768
Proc Natl Acad Sci U S A. 2016 Nov 22;113(47):13402-13407
pubmed: 27821780
J Mol Biol. 2005 Apr 22;348(1):231-43
pubmed: 15808866
Cell Rep. 2016 Feb 2;14(4):679-685
pubmed: 26804901
Science. 2015 Apr 24;348(6233):457-60
pubmed: 25908824
Sci Adv. 2018 May 30;4(5):eaas9098
pubmed: 29854950
Nat Struct Mol Biol. 2012 Oct;19(10):1018-22
pubmed: 23001004
Cell. 2004 Mar 5;116(5):725-36
pubmed: 15006354
PLoS Biol. 2013;11(3):e1001508
pubmed: 23554576
FEBS Lett. 2016 Mar;590(5):655-60
pubmed: 26879042
Nat Struct Mol Biol. 2009 Mar;16(3):274-80
pubmed: 19198590
J Mol Biol. 2014 Jan 9;426(1):185-98
pubmed: 24055377
J Mol Biol. 2018 May 25;430(11):1607-1620
pubmed: 29704493
J Cell Biol. 1970 Apr;45(1):130-45
pubmed: 5458992
J Mol Biol. 2018 Dec 7;430(24):5196-5206
pubmed: 30539762
Science. 2015 Nov 6;350(6261):678-80
pubmed: 26405228
Protein Sci. 2006 Feb;15(2):242-7
pubmed: 16385000

Auteurs

Marija Liutkute (M)

Department of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.

Ekaterina Samatova (E)

Department of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.

Marina V Rodnina (MV)

Department of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, 37077 Göttingen, Germany.

Articles similaires

[Redispensing of expensive oral anticancer medicines: a practical application].

Lisanne N van Merendonk, Kübra Akgöl, Bastiaan Nuijen
1.00
Humans Antineoplastic Agents Administration, Oral Drug Costs Counterfeit Drugs

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male

Classifications MeSH