Biotic soil-plant interaction processes explain most of hysteric soil CO
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
22 01 2020
22 01 2020
Historique:
received:
19
10
2018
accepted:
26
11
2019
entrez:
24
1
2020
pubmed:
24
1
2020
medline:
24
1
2020
Statut:
epublish
Résumé
Ecosystem carbon flux partitioning is strongly influenced by poorly constrained soil CO
Identifiants
pubmed: 31969580
doi: 10.1038/s41598-019-55390-6
pii: 10.1038/s41598-019-55390-6
pmc: PMC6976568
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
905Commentaires et corrections
Type : ErratumIn
Références
Schimel, D. et al. Contribution of increasing CO
doi: 10.1126/science.287.5460.2004
Jenerette, G. D. & Lal, R. Hydrologic sources of carbon cycling uncertainty throughout the terrestrial-aquatic continuum. Global Change Biology 11, 1873–1882 (2005).
Scott, R. L., Jenerette, G. D., Potts, D. L. & Huxman, T. E. Effects of seasonal drought on net carbon dioxide exchange from a woody-plant-encroached semiarid grassland. Journal of Geophysical Research-Biogeosciences 114, 13, doi:G0400410.1029/2008jg000900 (2009).
Barba, J. et al. Comparing ecosystem and soil respiration: Review and key challenges of tower-based and soil measurements. Agricultural and Forest Meteorology 249, 434–443, https://doi.org/10.1016/j.agrformet.2017.10.028 (2018).
doi: 10.1016/j.agrformet.2017.10.028
Law, B. E. et al. Spatial and temporal variation in respiration in a young ponderosa pine forests during a summer drought. Agricultural and Forest Meteorology 110, 27–43 (2001).
doi: 10.1016/S0168-1923(01)00279-9
Barron-Gafford, G. A., Scott, R. L., Jenerette, G. D. & Huxman, T. E. The relative controls of temperature, soil moisture, and plant functional group on soil CO
doi: 10.1029/2010JG001442
Baldocchi, D. D. Assessing the eddy covariance technique for evaluating carbon dioxide exchange rates of ecosystems: past, present and future. Global Change Biology 9, 479–492 (2003).
doi: 10.1046/j.1365-2486.2003.00629.x
Reichstein, M. et al. On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm. Global Change Biology 11, 1424–1439 (2005).
doi: 10.1111/j.1365-2486.2005.001002.x
Desai, A. R. et al. Cross-site evaluation of eddy covariance GPP and RE decomposition techniques. Agricultural and Forest Meteorology 148, 821–838, https://doi.org/10.1016/j.agrformet.2007.11.012 (2008).
doi: 10.1016/j.agrformet.2007.11.012
Mahecha, M. D. et al. Global convergence in the temperature sensitivity of respiration at ecosystem level. Science 329, 838–840, https://doi.org/10.1126/science.1189587 (2010).
doi: 10.1126/science.1189587
pubmed: 20603495
Savage, K., Davidson, E. A. & Tang, J. Diel patterns of autotrophic and heterotrophic respiration among phenological stages. Global Change Biology https://doi.org/10.1111/gcb.12108 (2012).
doi: 10.1111/gcb.12108
Vargas, R. et al. On the multi-temporal correlation between photosynthesis and soil CO
doi: 10.1111/j.1469-8137.2011.03771.x
Ogle, K. et al. Quantifying ecological memory in plant and ecosystem processes. Ecology Letters 18, 221–235, https://doi.org/10.1111/ele.12399 (2015).
doi: 10.1111/ele.12399
pubmed: 25522778
Barron-Gafford, G. A. et al. Quantifying the timescales over which exogenous and endogenous conditions affect soil respiration. New Phytologist 202, 442–454, https://doi.org/10.1111/nph.12675 (2014).
doi: 10.1111/nph.12675
pubmed: 24417567
Lloyd, J. & Taylor, J. A. On the temperature-dependence of soil respiration. Functional Ecology 8, 315–323 (1994).
doi: 10.2307/2389824
Cable, J. M., Ogle, K., Tyler, A. P., Pavao-Zuckerman, M. A. & Huxman, T. E. Woody plant encroachment impacts on soil carbon and microbial processes: results from a hierarchical Bayesian analysis of soil incubation data. Plant and Soil 320, 153–167, https://doi.org/10.1007/s11104-008-9880-1 (2009).
doi: 10.1007/s11104-008-9880-1
Jin, Z., Dong, Y. S., Qi, Y. C. & An, Z. S. Soil respiration and net primary productivity in perennial grass and desert shrub ecosystems at the Ordos Plateau of Inner Mongolia, China. Journal of Arid Environments 74, 1248–1256, https://doi.org/10.1016/j.jaridenv.2010.05.018 (2010).
doi: 10.1016/j.jaridenv.2010.05.018
Zhang, N., Zhao, Y.-S. & Yu, G.-R. Simulated annual carbon fluxes of grassland ecosystems in extremely arid conditions. Ecological Research 24, 185–206, https://doi.org/10.1007/s11284-008-0497-x (2009).
doi: 10.1007/s11284-008-0497-x
Sanchez-Canete, E. P., Scott, R. L., van Haren, J. & Barron-Gafford, G. A. Improving the accuracy of the gradient method for determining soil carbon dioxide efflux. Journal of Geophysical Research-Biogeosciences 122, 50–64, https://doi.org/10.1002/2016jg003530 (2017).
doi: 10.1002/2016jg003530
Zhou, X. H. et al. Concurrent and lagged impacts of an anomalously warm year on autotrophic and heterotrophic components of soil respiration: a deconvolution analysis. New Phytologist 187, 184–198, https://doi.org/10.1111/j.1469-8137.2010.03256.x (2011).
doi: 10.1111/j.1469-8137.2010.03256.x
Cable, J. M. et al. Antecedent conditions influence soil respiration differences in shrub and grass patches. Ecosystems 16, 1230–1247, https://doi.org/10.1007/s10021-013-9679-7 (2013).
doi: 10.1007/s10021-013-9679-7
Cueva, A., Bahn, M., Litvak, M., Pumpanen, J. & Vargas, R. A multisite analysis of temporal random errors in soil CO
doi: 10.1002/2014jg002690
Davidson, E. A., Samanta, S., Caramori, S. S. & Savage, K. The Dual Arrhenius and Michaelis-Menten kinetics model for decomposition of soil organic matter at hourly to seasonal time scales. Global Change Biology 18, 371–384, https://doi.org/10.1111/j.1365-2486.2011.02546.x (2012).
doi: 10.1111/j.1365-2486.2011.02546.x
Ogle, K., Ryan, E., Dijkstra, F. A. & Pendall, E. Quantifying and reducing uncertainties in estimated soil CO
doi: 10.1002/2016jg003385
Raich, J. W. & Schlesinger, W. H. The global carbon-dioxide flux in soil respiration and its relationship to vegetation and climate. Tellus Series B-Chemical and Physical Meteorlogy 44, 81–99 (1992).
doi: 10.3402/tellusb.v44i2.15428
Parkin, T. B. & Kaspar, T. C. Temperature controls on diurnal carbon dioxide flux: Implications for estimating soil carbon loss. Soil Science Society of America Journal 67, 1763–1772 (2003).
doi: 10.2136/sssaj2003.1763
Tang, J. W., Baldocchi, D. D. & Xu, L. Tree photosynthesis modulates soil respiration on a diurnal time scale. Global Change Biology 11, 1298–1304 (2005).
doi: 10.1111/j.1365-2486.2005.00978.x
Gaumont-Guay, D. et al. Interpreting the dependence of soil respiration on soil temperature and water content in a boreal aspen stand. Agricultural And Forest Meteorology 140, 220–235 (2006).
doi: 10.1016/j.agrformet.2006.08.003
Carbone, M. S., Winston, G. C. & Trumbore, S. E. Soil respiration in perennial grass and shrub ecosystems: Linking environmental controls with plant and microbial sources on seasonal and diel timescales. Journal of Geophysical Research-Biogeosciences 113 (2008).
Riveros-Iregui, D. A., McGlynn, B. L., Epstein, H. E. & Welsch, D. L. Interpretation and evaluation of combined measurement techniques for soil CO
Vargas, R. & Allen, M. F. Diel patterns of soil respiration in a tropical forest after Hurricane Wilma. Journal of Geophysical Research-Biogeosciences 113 (2008a).
Vargas, R. & Allen, M. F. Dynamics of fine root, fungal rhizomorphs, and soil respiration in a mixed temperate forest: Integrating sensors and observations. Vadose Zone Journal 7, 1055–1064 (2008b).
doi: 10.2136/vzj2007.0138
Vargas, R. & Allen, M. F. Environmental controls and the influence of vegetation type, fine roots and rhizomorphs on diel and seasonal variation in soil respiration. New Phytologist 179, 460–471 (2008).
doi: 10.1111/j.1469-8137.2008.02481.x
Liu, Z., Zhang, Y. Q., Fa, K. Y., Qin, S. G. & She, W. W. Rainfall pulses modify soil carbon emission in a semiarid desert. Catena 155, 147–155, https://doi.org/10.1016/j.catena.2017.03.011 (2017).
doi: 10.1016/j.catena.2017.03.011
Zhong, Y. Q. W., Yan, W. M., Zong, Y. Z. & Shangguan, Z. P. Biotic and abiotic controls on the diel and seasonal variation in soil respiration and its components in a wheat field under long-term nitrogen fertilization. Field Crop. Res. 199, 1–9, https://doi.org/10.1016/j.fcr.2016.09.014 (2016).
doi: 10.1016/j.fcr.2016.09.014
Song, W. M. et al. Contrasting diel hysteresis between soil autotrophic and heterotrophic respiration in a desert ecosystem under different rainfall scenarios. Scientific Reports 5, https://doi.org/10.1038/srep16779 (2015).
Zhang, Q. et al. The hysteresis response of soil CO
doi: 10.1002/2015jg003047
Liu, J. B. et al. Abiotic CO
doi: 10.1007/s12665-014-3595-9
Oikawa, P. Y. et al. Unifying soil respiration pulses, inhibition, and temperature hysteresis through dynamics of labile soil carbon and O-2. Journal of Geophysical Research-Biogeosciences 119, 521–536, https://doi.org/10.1002/2013jg002434 (2014).
doi: 10.1002/2013jg002434
Wang, B. et al. Soil water regulates the control of photosynthesis on diel hysteresis between soil respiration and temperature in a desert shrubland. Biogeosciences 14, 3899–3908, https://doi.org/10.5194/bg-14-3899-2017 (2017).
doi: 10.5194/bg-14-3899-2017
Wang, B. et al. Soil moisture modifies the response of soil respiration to temperature in a desert shrub ecosystem. Biogeosciences 11, 259–268, https://doi.org/10.5194/bg-11-259-2014 (2014).
doi: 10.5194/bg-11-259-2014
Hamilton, E. W., Heckathorn, S. A., Joshi, P., Wang, D. & Barua, D. Interactive effects of elevated CO
doi: 10.1111/j.1744-7909.2008.00747.x
pubmed: 19017125
Potts, D. L., Barron-Gafford, G. A. & Jenerette, G. D. Metabolic acceleration quantifies biological systems’ ability to up-regulate metabolism in response to episodic resource availability. Journal of Arid Environments 104, 9–16, https://doi.org/10.1016/j.jaridenv.2014.01.018 (2014).
doi: 10.1016/j.jaridenv.2014.01.018
Potts, D. L. et al. Antecedent moisture and seasonal precipitation influence the response of canopy-scale carbon and water exchange to rainfall pulses in a semi-arid grassland. New Phytologist 170, 849–860 (2006).
doi: 10.1111/j.1469-8137.2006.01732.x
Barron-Gafford, G. A. et al. Impacts of hydraulic redistribution on grass-tree competition vs facilitation in a semi-arid savanna. New Phytologist 215, 1451–1461, https://doi.org/10.1111/nph.14693 (2017).
doi: 10.1111/nph.14693
pubmed: 28737219
Ekblad, Aa & Hogberg, P. Natural abundance of 13C in CO
doi: 10.1007/s004420100667
Högberg, P. et al. Large-scale forest girdling shows that current photosynthesis drives soil respiration. Nature 411, 789–792 (2001).
doi: 10.1038/35081058
Thompson, M. V. & Holbrook, N. M. Application of a singlesolute non-steady-state phloem model to the study of long-distance assimilate transport. Journal of Theoretical Biology 220, 419–455 (2003).
doi: 10.1006/jtbi.2003.3115
Baldocchi, D., Tang, J. & Xu, L. How switches and lags in biophysical regulators affect spatial-temporal variation of soil respiration in an oak-grass savanna. Journal of Geophysical Research 111, G02008, doi:02010.01029/02005JG000063. (2006).
Carbone, M. S. & Trumbore, S. E. Contribution of new photosynthetic assimilates to respiration by perennial grasses and shrubs: residence times and allocation patterns. New Phytologist 176, 124–135 (2007).
doi: 10.1111/j.1469-8137.2007.02153.x
Phillips, C. L., Nickerson, N., Risk, D. & Bond, B. J. Interpreting diel hysteresis between soil respiration and temperature. Global Change Biology https://doi.org/10.1111/j.1365-2486.2010.02250. (2010).
Riveros-Iregui, D. A. et al. Diurnal hysteresis between soil CO
Barron-Gafford, G. A., Scott, R. L., Jenerette, G. D., Hamerlynck, E. P. & Huxman, T. E. Temperature and precipitation controls over leaf- and ecosystem-level CO
Barron-Gafford, G. A., Scott, R. L., Jenerette, G. D., Hamerlynck, E. P. & Huxman, T. E. Landscape and environmental controls over leaf and ecosystem carbon dioxide fluxes under woody plant expansion. J. Ecol. 101, 1471–1483, https://doi.org/10.1111/1365-2745.12161 (2013).
doi: 10.1111/1365-2745.12161
Potts, D. L., Scott, R. L., Cable, J. M., Huxman, T. E. & Williams, D. G. Sensitivity of mesquite shrubland CO
doi: 10.1890/07-1177.1
Potts, D. L., Huxman, T. E., Scott, R. L., Williams, D. G. & Goodrich, D. C. The sensitivity of ecosystem carbon exchange to seasonal precipitation and woody plant encroachment. Oecologia 150, 453–463 (2006).
doi: 10.1007/s00442-006-0532-y
De Soyza, A. G., Franc, A. C., Virginia, R. A., Reynolds, J. E. & Whitford, W. G. Effects of plant size on photosynthesis and water relations in the desert shrub Prosopis glandulosa (Fabaceae). American Journal of Botany 83, 99–105 (1996).
doi: 10.1002/j.1537-2197.1996.tb13880.x
Hamerlynck, E. P., Scott, R. L., Sanchez-Canete, E. P. & Barron-Gafford, G. A. Nocturnal soil CO
doi: 10.1002/2013jg002495
Angert, A. et al. Using O
doi: 10.5194/bg-12-2089-2015
Ma, J., Liu, R. & Li, Y. Abiotic contribution to total soil CO
doi: 10.1007/s40333-016-0061-4
Emmerich, W. E. Carbon dioxide fluxes in a semiarid environment with high carbonate soils. Agricultural and Forest Meteorology 116, 91–102, https://doi.org/10.1016/s0168-1923(02)00231-9 (2003).
doi: 10.1016/s0168-1923(02)00231-9
Sánchez-Cañete, E. P., Chorover, J. & Barron-Gafford, G. A. A considerable fraction of soil-respired CO
Mielnick, P., Dugas, W. A., Mitchell, K. & Havstad, K. Long-term measurements of CO
doi: 10.1016/j.jaridenv.2004.06.001
Stevenson, B. A. & Verburg, P. S. J. Effluxed CO
doi: 10.1016/j.soilbio.2005.11.028
Stone, R. Ecosystems - Have desert researchers discovered a hidden loop in the carbon cycle? Science 320, 1409–1410, https://doi.org/10.1126/science.320.5882.1409 (2008).
doi: 10.1126/science.320.5882.1409
pubmed: 18556524
Sanchez-Canete, E. P., Kowalski, A. S., Serrano-Ortiz, P., Perez-Priego, O. & Domingo, F. Deep CO
doi: 10.5194/bg-10-6591-2013
Verdier, B. et al. Climate and atmosphere simulator for experiments on ecological systems in changing environments. Environmental Science & Technology 48, 8744–8753, https://doi.org/10.1021/es405467s (2014).
doi: 10.1021/es405467s
van Haren, J. et al. CO
doi: 10.1130/g38569.1
Pangle, L. A. et al. The Landscape Evolution Observatory: A large-scale controllable infrastructure to study coupled Earth-surface processes. Geomorphology 244, 190–203, https://doi.org/10.1016/j.geomorph.2015.01.020 (2015).
doi: 10.1016/j.geomorph.2015.01.020
Tang, J. W., Baldocchi, D. D., Qi, Y. & Xu, L. K. Assessing soil CO
doi: 10.1016/S0168-1923(03)00112-6
Tang, J. W., Misson, L., Gershenson, A., Cheng, W. X. & Goldstein, A. H. Continuous measurements of soil respiration with and without roots in a ponderosa pine plantation in the Sierra Nevada Mountains. Agricultural and Forest Meteorology 132, 212–227 (2005).
doi: 10.1016/j.agrformet.2005.07.011
Myklebust, M. C., Hipps, L. E. & Ryel, R. J. Comparison of eddy covariance, chamber, and gradient methods of measuring soil CO
doi: 10.1016/j.agrformet.2008.06.016
Barron-Gafford, G. A. et al. Herbivory of wild Manduca sexta causes fast down-regulation of photosynthetic efficiency in Datura wrightii: an early signaling cascade visualized by chlorophyll fluorescence. Photosynthesis Research 113, 249–260, https://doi.org/10.1007/s11120-012-9741-x (2012).
doi: 10.1007/s11120-012-9741-x
pubmed: 22576017