Systemic HIV and SIV latency reversal via non-canonical NF-κB signalling in vivo.
Alkynes
/ pharmacology
Animals
Anti-Retroviral Agents
/ pharmacology
HIV Infections
/ metabolism
HIV-1
/ drug effects
Macaca mulatta
Mice
NF-kappa B
/ metabolism
Oligopeptides
/ pharmacology
Simian Acquired Immunodeficiency Syndrome
/ metabolism
Simian Immunodeficiency Virus
/ drug effects
Virus Latency
/ drug effects
Journal
Nature
ISSN: 1476-4687
Titre abrégé: Nature
Pays: England
ID NLM: 0410462
Informations de publication
Date de publication:
02 2020
02 2020
Historique:
received:
12
04
2019
accepted:
16
12
2019
pubmed:
24
1
2020
medline:
22
4
2020
entrez:
24
1
2020
Statut:
ppublish
Résumé
Long-lasting, latently infected resting CD4
Identifiants
pubmed: 31969707
doi: 10.1038/s41586-020-1951-3
pii: 10.1038/s41586-020-1951-3
pmc: PMC7111210
mid: NIHMS1546841
doi:
Substances chimiques
Alkynes
0
Anti-Retroviral Agents
0
N,N'-(2,2'-(hexa-2,4-diyne-1,6-diylbis(oxy))bis(2,3-dihydro-1H-indene-2,1-diyl))bis(1-(2-cyclohexyl-2-(2-(methylamino)propanamido)acetyl)pyrrolidine-2-carboxamide)
0
NF-kappa B
0
Oligopeptides
0
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
160-165Subventions
Organisme : NIAID NIH HHS
ID : P30 AI050409
Pays : United States
Organisme : NIMH NIH HHS
ID : R01 MH108179
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI126619
Pays : United States
Organisme : NIAID NIH HHS
ID : AI111899
Pays : United States
Organisme : NIAID NIH HHS
ID : AI123010
Pays : United States
Organisme : NCI NIH HHS
ID : P30 CA016086
Pays : United States
Organisme : NIAID NIH HHS
ID : R56 AI117851
Pays : United States
Organisme : NIAID NIH HHS
ID : AI1117851
Pays : United States
Organisme : NIAID NIH HHS
ID : U19 AI096113
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI123010
Pays : United States
Organisme : NIH HHS
ID : P51 OD011132
Pays : United States
Organisme : FIC NIH HHS
ID : D43 TW009532
Pays : United States
Organisme : NIH HHS
ID : S10 OD026799
Pays : United States
Organisme : NIAID NIH HHS
ID : R01 AI111899
Pays : United States
Organisme : NCI NIH HHS
ID : 5P30CA016086-41
Pays : United States
Organisme : NCI NIH HHS
ID : HHSN261200800001E
Pays : United States
Organisme : NIAID NIH HHS
ID : AI096113
Pays : United States
Organisme : NIMH NIH HHS
ID : MH108179
Pays : United States
Organisme : NIAID NIH HHS
ID : P30 AI050410
Pays : United States
Organisme : NIAID NIH HHS
ID : UM1 AI124436
Pays : United States
Commentaires et corrections
Type : CommentIn
Type : CommentIn
Références
Finzi, D. et al. Latent infection of CD4
pubmed: 10229227
Archin, N. M. et al. Interval dosing with the HDAC inhibitor vorinostat effectively reverses HIV latency. J. Clin. Invest. 127, 3126–3135 (2017).
pubmed: 28714868
pmcid: 5531421
Archin, N. M. et al. Administration of vorinostat disrupts HIV-1 latency in patients on antiretroviral therapy. Nature 487, 482–485 (2012).
pubmed: 22837004
pmcid: 3704185
Elliott, J. H. et al. Activation of HIV transcription with short-course vorinostat in HIV-infected patients on suppressive antiretroviral therapy. PLoS Pathog. 10, e1004473 (2014).
pubmed: 25393648
pmcid: 4231123
Gutiérrez, C. et al. Bryostatin-1 for latent virus reactivation in HIV-infected patients on antiretroviral therapy. AIDS 30, 1385–1392 (2016).
pubmed: 26891037
Kulkosky, J. et al. Intensification and stimulation therapy for human immunodeficiency virus type 1 reservoirs in infected persons receiving virally suppressive highly active antiretroviral therapy. J. Infect. Dis. 186, 1403–1411 (2002).
pubmed: 12404155
Prins, J. M. et al. Immuno-activation with anti-CD3 and recombinant human IL-2 in HIV-1-infected patients on potent antiretroviral therapy. AIDS 13, 2405–2410 (1999).
pubmed: 10597782
Rasmussen, T. A. et al. Panobinostat, a histone deacetylase inhibitor, for latent-virus reactivation in HIV-infected patients on suppressive antiretroviral therapy: a phase 1/2, single group, clinical trial. Lancet HIV 1, e13–e21 (2014).
pubmed: 26423811
Søgaard, O. S. et al. The depsipeptide romidepsin reverses HIV-1 latency in vivo. PLoS Pathog. 11, e1005142 (2015).
pubmed: 26379282
pmcid: 4575032
Ke, R., Conway, J. M., Margolis, D. M. & Perelson, A. S. Determinants of the efficacy of HIV latency-reversing agents and implications for drug and treatment design. JCI Insight 3, e123052 (2018).
pmcid: 6237475
Sun, S. C. The noncanonical NF-κB pathway. Immunol. Rev. 246, 125–140 (2012).
pubmed: 22435551
pmcid: 3313452
Fulda, S. Molecular pathways: targeting death receptors and Smac mimetics. Clin. Cancer Res. 20, 3915–3920 (2014).
pubmed: 24824309
Pache, L. et al. BIRC2/cIAP1 is a negative regulator of HIV-1 transcription and can be targeted by Smac mimetics to promote reversal of viral latency. Cell Host Microbe 18, 345–353 (2015).
pubmed: 26355217
pmcid: 4617541
Hennessy, E. J. et al. Discovery of a novel class of dimeric Smac mimetics as potent IAP antagonists resulting in a clinical candidate for the treatment of cancer (AZD5582). J. Med. Chem. 56, 9897–9919 (2013).
pubmed: 24320998
Honeycutt, J. B. et al. T cells establish and maintain CNS viral infection in HIV-infected humanized mice. J. Clin. Invest. 128, 2862–2876 (2018).
pubmed: 29863499
pmcid: 6026008
Kessing, C. F. et al. In vivo suppression of HIV rebound by didehydro-cortistatin A, a “block-and-lock” strategy for HIV-1 treatment. Cell Reports 21, 600–611 (2017).
pubmed: 29045830
Tsai, P. et al. In vivo analysis of the effect of panobinostat on cell-associated HIV RNA and DNA levels and latent HIV infection. Retrovirology 13, 36 (2016).
pubmed: 27206407
pmcid: 4875645
Melkus, M. W. et al. Humanized mice mount specific adaptive and innate immune responses to EBV and TSST-1. Nat. Med. 12, 1316–1322 (2006).
pubmed: 17057712
Choudhary, S. K. et al. Latent HIV-1 infection of resting CD4
pubmed: 22013038
pmcid: 3255863
Denton, P. W. et al. Generation of HIV latency in humanized BLT mice. J. Virol. 86, 630–634 (2012).
pubmed: 22013053
pmcid: 3255928
Wahl, A. et al. Precision mouse models with expanded tropism for human pathogens. Nat. Biotechnol. 37, 1163–1173 (2019).
pubmed: 31451733
pmcid: 6776695
Mavigner, M. et al. Simian immunodeficiency virus persistence in cellular and anatomic reservoirs in antiretroviral therapy-suppressed infant rhesus macaques. J. Virol. 92, e00562-18 (2018).
Mavigner, M. et al. Pharmacological modulation of the Wnt/β-catenin pathway inhibits proliferation and promotes differentiation of long-lived memory CD4 T cells in antiretroviral therapy-suppressed simian immunodeficiency virus-infected macaques. J. Virol. 94, e01094-19 (2019)
Abrahams, M. R. et al. The replication-competent HIV-1 latent reservoir is primarily established near the time of therapy initiation. Sci. Transl. Med. 11, eaaw5589 (2019).
pubmed: 31597754
pmcid: 7233356
Anderson, E. M. & Maldarelli, F. The role of integration and clonal expansion in HIV infection: live long and prosper. Retrovirology 15, 71 (2018).
pubmed: 30352600
pmcid: 6199739
Ferris, A. L. et al. Clonal expansion of SIV-infected cells in macaques on antiretroviral therapy is similar to that of HIV-infected cells in humans. PLoS Pathog. 15, e1007869 (2019).
pubmed: 31291371
pmcid: 6619828
Kuo, H. H. & Lichterfeld, M. Recent progress in understanding HIV reservoirs. Curr. Opin. HIV AIDS 13, 137–142 (2018).
pubmed: 29232209
pmcid: 5806203
Clutton, G. T. & Jones, R. B. Diverse impacts of HIV latency-reversing agents on CD8
pubmed: 29988382
pmcid: 6023971
Gupta, R. K. et al. HIV-1 remission following CCR5Δ32/Δ32 haematopoietic stem-cell transplantation. Nature 568, 244–248 (2019).
pubmed: 30836379
pmcid: 7275870
Hütter, G. et al. Long-term control of HIV by CCR5 Delta32/Delta32 stem-cell transplantation. N. Engl. J. Med. 360, 692–698 (2009).
pubmed: 19213682
Nixon, C, C., Mavigner, M., Silvestri G. & Garcia, J. V. In vivo models of human immunodeficiency virus persistence and cure strategies. J. Infect. Dis. 215, S142–S151 (2017).
Archin, N. M. et al. Expression of latent HIV induced by the potent HDAC inhibitor suberoylanilide hydroxamic acid. AIDS Res. Hum. Retroviruses 25, 207–212 (2009).
pubmed: 19239360
pmcid: 2853863
Keedy, K. S. et al. A limited group of class I histone deacetylases acts to repress human immunodeficiency virus type 1 expression. J. Virol. 83, 4749–4756 (2009).
pubmed: 19279091
pmcid: 2682072
Trumble, I. M. et al. SLDAssay: a software package and web tool for analyzing limiting dilution assays. J. Immunol. Methods 450, 10–16 (2017).
pubmed: 28733216
pmcid: 5595663
Dobin, A. et al. STAR: ultrafast universal RNA-seq aligner. Bioinformatics 29, 15–21 (2013).
pubmed: 23104886
Patro, R., Duggal, G., Love, M. I., Irizarry, R. A. & Kingsford, C. Salmon provides fast and bias-aware quantification of transcript expression. Nat. Methods 14, 417–419 (2017).
pubmed: 28263959
pmcid: 5600148
Love, M. I., Huber, W. & Anders, S. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2. Genome Biol. 15, 550 (2014).
pubmed: 25516281
pmcid: 4302049
Benjamini, Y. & Hochberg, Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57, 289–300 (1995).
Subramanian, A. et al. Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc. Natl Acad. Sci. USA 102, 15545–15550 (2005).
pubmed: 16199517
pmcid: 1239896
Denton, P. W. et al. Antiretroviral pre-exposure prophylaxis prevents vaginal transmission of HIV-1 in humanized BLT mice. PLoS Med. 5, e16 (2008).
pubmed: 18198941
pmcid: 2194746
Denton, P. W. et al. One percent tenofovir applied topically to humanized BLT mice and used according to the CAPRISA 004 experimental design demonstrates partial protection from vaginal HIV infection, validating the BLT model for evaluation of new microbicide candidates. J. Virol. 85, 7582–7593 (2011).
pubmed: 21593172
pmcid: 3147928
Reed, L. J. & Muench, H. A simple method of estimating fifty per cent endpoints. Am. J. Epidemiol. 27, 493–497 (1938).
Palesch, D. et al. Short-term pegylated interferon α2a treatment does not significantly reduce the viral reservoir of simian immunodeficiency virus-infected, antiretroviral therapy-treated rhesus macaques. J. Virol. 92, e00279-18 (2018).
pubmed: 29720521
pmcid: 6026735
Hansen, S. G. et al. Addendum: immune clearance of highly pathogenic SIV infection. Nature 547, 123–124 (2017).
pubmed: 28636599
Li, H. et al. Envelope residue 375 substitutions in simian–human immunodeficiency viruses enhance CD4 binding and replication in rhesus macaques. Proc. Natl Acad. Sci. USA 113, E3413–E3422 (2016).
pubmed: 27247400
pmcid: 4914158
Krisko, J. F., Martinez-Torres, F., Foster, J. L. & Garcia, J. V. HIV restriction by APOBEC3 in humanized mice. PLoS Pathog. 9, e1003242 (2013).
pubmed: 23555255
pmcid: 3610649
Cartwright, E. K. et al. CD8
pubmed: 27653601
pmcid: 5087330
Rosenbloom, D. I. S., Hill, A. L., Laskey, S. B. & Siliciano, R. F. Re-evaluating evolution in the HIV reservoir. Nature 551, E6–E9 (2017).
pubmed: 29168805
pmcid: 6103791
Zimin, A. V. et al. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Biol. Direct 9, 20 (2014).
pubmed: 25319552
pmcid: 4214606
Huang, W., Sherman, B. T. & Lempicki, R. A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protocols 4, 44–57 (2009).
Li, J. et al. Isolation and transcriptome analyses of human erythroid progenitors: BFU-E and CFU-E. Blood 124, 3636–3645 (2014).
pubmed: 25339359
pmcid: 4256913
Roederer, M., Nozzi, J. L. & Nason, M. C. SPICE: Exploration and analysis of post cytometric complex multivariate datasets. Cytometry 79A, 167–174 (2014).