A Hybrid Approach for Modeling Type 2 Diabetes Mellitus Progression.

hidden Markov model machine learning prognostic modelling risk prediction risk scoring type 2 diabetes mellitus

Journal

Frontiers in genetics
ISSN: 1664-8021
Titre abrégé: Front Genet
Pays: Switzerland
ID NLM: 101560621

Informations de publication

Date de publication:
2019
Historique:
received: 08 07 2019
accepted: 09 10 2019
entrez: 24 1 2020
pubmed: 24 1 2020
medline: 24 1 2020
Statut: epublish

Résumé

Type 2 Diabetes Mellitus (T2DM) is a chronic, progressive metabolic disorder characterized by hyperglycemia resulting from abnormalities in insulin secretion, insulin action, or both. It is associated with an increased risk of developing vascular complication of micro as well as macro nature. Because of its inconspicuous and heterogeneous character, the management of T2DM is very complex. Modeling physiological processes over time demonstrating the patient's evolving health condition is imperative to comprehending the patient's current status of health, projecting its likely dynamics and assessing the requisite care and treatment measures in future. Hidden Markov Model (HMM) is an effective approach for such prognostic modeling. However, the nature of the clinical setting, together with the format of the Electronic Medical Records (EMRs) data, in particular the sparse and irregularly sampled clinical data which is well understood to present significant challenges, has confounded standard HMM. In the present study, we proposed an approximation technique based on Newton's Divided Difference Method (NDDM) as a component with HMM to determine the risk of developing diabetes in an individual over different time horizons using irregular and sparsely sampled EMRs data. The proposed method is capable of exploiting available sequences of clinical measurements obtained from a longitudinal sample of patients for effective imputation and improved prediction performance. Furthermore, results demonstrated that the discrimination capability of our proposed method, in prognosticating diabetes risk, is superior to the standard HMM.

Identifiants

pubmed: 31969896
doi: 10.3389/fgene.2019.01076
pmc: PMC6958689
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1076

Informations de copyright

Copyright © 2020 Perveen, Shahbaz, Ansari, Keshavjee and Guergachi.

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Auteurs

Sajida Perveen (S)

Department of Computer Science & Engineering, University of Engineering & Technology, Lahore, Pakistan.

Muhammad Shahbaz (M)

Department of Computer Science & Engineering, University of Engineering & Technology, Lahore, Pakistan.
Research Lab for Advanced System Modelling, Ryerson University, Toronto, ON, Canada.

Muhammad Sajjad Ansari (MS)

Division of Science and Technology, University of Education, Lahore, Pakistan.

Karim Keshavjee (K)

Research Lab for Advanced System Modelling, Ryerson University, Toronto, ON, Canada.
Institute for Health Policy, Management and Evaluation, University of Toronto, Toronto, ON, Canada.

Aziz Guergachi (A)

Research Lab for Advanced System Modelling, Ryerson University, Toronto, ON, Canada.
Ted Rogers School of Information Technology Management, Ryerson University, Toronto, ON, Canada.
Department of Mathematics & Statistics, York University, Toronto, ON, Canada.

Classifications MeSH