Application of data mining in a cohort of Italian subjects undergoing myocardial perfusion imaging at an academic medical center.


Journal

Computer methods and programs in biomedicine
ISSN: 1872-7565
Titre abrégé: Comput Methods Programs Biomed
Pays: Ireland
ID NLM: 8506513

Informations de publication

Date de publication:
Jun 2020
Historique:
received: 11 03 2019
revised: 15 01 2020
accepted: 15 01 2020
pubmed: 26 1 2020
medline: 25 3 2021
entrez: 26 1 2020
Statut: ppublish

Résumé

Coronary artery disease (CAD) is still one of the primary causes of death in the developed countries. Stress single-photon emission computed tomography is used to evaluate myocardial perfusion and ventricular function in patients with suspected or known CAD. This study sought to test data mining and machine learning tools and to compare some supervised learning algorithms in a large cohort of Italian subjects with suspected or known CAD who underwent stress myocardial perfusion imaging. The dataset consisted of 10,265 patients with suspected or known CAD. The analysis was conducted using Knime analytics platform in order to implement Random Forests, C4.5, Gradient boosted tree, Naïve Bayes, and K nearest neighbor (KNN) after a procedure of features filtering. K-fold cross-validation was employed. Accuracy, error, precision, recall, and specificity were computed through the above-mentioned algorithms. Random Forests and gradients boosted trees obtained the highest accuracy (>95%), while it was comprised between 83% and 88%. The highest value for sensitivity and specificity was obtained by C4.5 (99.3%) and by Gradient boosted tree (96.9%). Naïve Bayes had the lowest precision (70.9%) and specificity (72.0%), KNN the lowest recall and sensitivity (79.2%). The high scores obtained by the implementation of the algorithms suggests health facilities consider the idea of including services of advanced data analysis to help clinicians in decision-making. Similar applications of this kind of study in other contexts could support this idea.

Identifiants

pubmed: 31981760
pii: S0169-2607(19)30341-4
doi: 10.1016/j.cmpb.2020.105343
pii:
doi:

Types de publication

Journal Article Validation Study

Langues

eng

Sous-ensembles de citation

IM

Pagination

105343

Informations de copyright

Copyright © 2020. Published by Elsevier B.V.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Carlo Ricciardi (C)

Department of Advanced Biomedical Sciences, University Hospital of Naples 'Federico II', Naples, Italy.

Valeria Cantoni (V)

Department of Advanced Biomedical Sciences, University Hospital of Naples 'Federico II', Naples, Italy.

Giovanni Improta (G)

Department of Public Health, University Hospital of Naples 'Federico II', Naples, Italy.

Luigi Iuppariello (L)

Department of Neuroscience, Santobono-Pausilipon Children's Hospital, Naples, Italy.

Imma Latessa (I)

Department of Public Health, University Hospital of Naples 'Federico II', Naples, Italy.

Mario Cesarelli (M)

DIETI, University of Naples 'Federico II', Naples, Italy; Istituti Clinici Scientifici Maugeri IRCCS; Telese Terme (BN), Italy. Electronic address: cesarell@unina.it.

Maria Triassi (M)

Department of Public Health, University Hospital of Naples 'Federico II', Naples, Italy.

Alberto Cuocolo (A)

Department of Advanced Biomedical Sciences, University Hospital of Naples 'Federico II', Naples, Italy.

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Classifications MeSH