Progress toward the development of the small molecule equivalent of small interfering RNA.


Journal

Current opinion in chemical biology
ISSN: 1879-0402
Titre abrégé: Curr Opin Chem Biol
Pays: England
ID NLM: 9811312

Informations de publication

Date de publication:
06 2020
Historique:
received: 29 11 2019
revised: 30 12 2019
accepted: 02 01 2020
pubmed: 10 2 2020
medline: 18 5 2021
entrez: 10 2 2020
Statut: ppublish

Résumé

Given that many small molecules could bind to structured regions at sites that will not affect function, approaches that trigger degradation of RNA could provide a general way to affect biology. Indeed, targeted RNA degradation is an effective strategy to selectively and potently modulate biology. We describe several approaches to endow small molecules with the power to cleave RNAs. Central to these strategies is Inforna, which designs small molecules targeting RNA from human genome sequence. Inforna deduces the uniqueness of a druggable pocket, enables generation of hypotheses about functionality of the pocket, and defines on- and off-targets to drive compound optimization. RNA-binding compounds are then converted into cleavers that degrade the target directly or recruit an endogenous nuclease to do so. Cleaving compounds have significantly contributed to understanding and manipulating biological functions. Yet, there is much to be learned about how to affect human RNA biology with small molecules.

Identifiants

pubmed: 32036231
pii: S1367-5931(20)30002-8
doi: 10.1016/j.cbpa.2020.01.001
pmc: PMC7311281
mid: NIHMS1569360
pii:
doi:

Substances chimiques

RNA, Small Interfering 0
Small Molecule Libraries 0
Bleomycin 11056-06-7
bleomycetin 5DY91Y7601

Types de publication

Journal Article Research Support, N.I.H., Extramural Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

63-71

Subventions

Organisme : NINDS NIH HHS
ID : DP1 NS096898
Pays : United States
Organisme : NINDS NIH HHS
ID : P01 NS099114
Pays : United States
Organisme : NIGMS NIH HHS
ID : R01 GM097455
Pays : United States
Organisme : NINDS NIH HHS
ID : R33 NS096032
Pays : United States

Informations de copyright

Copyright © 2020 Elsevier Ltd. All rights reserved.

Déclaration de conflit d'intérêts

Conflict of interest statement The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: MDD is a founder of Expansion Therapeutics.

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Auteurs

Matthew D Disney (MD)

Scripps Research, Department of Chemistry, 110 Scripps Way, Jupiter, FL, 33458, USA. Electronic address: disney@scripps.edu.

Blessy M Suresh (BM)

Scripps Research, Department of Chemistry, 110 Scripps Way, Jupiter, FL, 33458, USA.

Raphael I Benhamou (RI)

Scripps Research, Department of Chemistry, 110 Scripps Way, Jupiter, FL, 33458, USA.

Jessica L Childs-Disney (JL)

Scripps Research, Department of Chemistry, 110 Scripps Way, Jupiter, FL, 33458, USA.

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Classifications MeSH