Precision medicine and actionable alterations in lung cancer: A single institution experience.
Adenocarcinoma
/ genetics
Adult
Aged
Aged, 80 and over
Anaplastic Lymphoma Kinase
/ genetics
ErbB Receptors
/ genetics
Female
Genetic Variation
Humans
Kaplan-Meier Estimate
Lung Neoplasms
/ genetics
Male
Middle Aged
Precision Medicine
Proportional Hazards Models
Proto-Oncogene Proteins B-raf
/ genetics
Registries
Retrospective Studies
Young Adult
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2020
2020
Historique:
received:
17
07
2019
accepted:
10
01
2020
entrez:
12
2
2020
pubmed:
12
2
2020
medline:
25
4
2020
Statut:
epublish
Résumé
Oncology has become more reliant on new testing methods and a greater use of electronic medical records, which provide a plethora of information available to physicians and researchers. However, to take advantage of vital clinical and research data for precision medicine, we must initially make an effort to create an infrastructure for the collection, storage, and utilization of this information with uniquely designed disease-specific registries that could support the collection of a large number of patients. In this study, we perform an in-depth analysis of a series of lung adenocarcinoma patients (n = 415) with genomic and clinical data in a recently created thoracic patient registry. Of the 415 patients with lung adenocarcinoma, 59% (n = 245) were female; the median age was 64 (range, 22-92) years with a median OS of 33.29 months (95% CI, 29.77-39.48). The most common actionable alterations were identified in EGFR (n = 177/415 [42.7%]), ALK (n = 28/377 [7.4%]), and BRAF V600E (n = 7/288 [2.4%]). There was also a discernible difference in survival for 222 patients, who had an actionable alteration, with a median OS of 39.8 months as compared to 193 wild-type patients with a median OS of 26.0 months (P<0.001). We identified an unprecedented number of actionable alterations [53.5% (222/415)], including distinct individual alteration rates, as compared with 15.0% and 22.3% in TCGA and GENIE respectively. The use of patient registries, focused genomic panels and the appropriate use of clinical guidelines in community and academic settings may influence cohort selection for clinical trials and improve survival outcomes.
Identifiants
pubmed: 32045431
doi: 10.1371/journal.pone.0228188
pii: PONE-D-19-20200
pmc: PMC7012442
doi:
Substances chimiques
ALK protein, human
EC 2.7.10.1
Anaplastic Lymphoma Kinase
EC 2.7.10.1
EGFR protein, human
EC 2.7.10.1
ErbB Receptors
EC 2.7.10.1
BRAF protein, human
EC 2.7.11.1
Proto-Oncogene Proteins B-raf
EC 2.7.11.1
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0228188Subventions
Organisme : NCI NIH HHS
ID : P30 CA033572
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA218545
Pays : United States
Organisme : NCI NIH HHS
ID : U54 CA209978
Pays : United States
Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
Références
J Thorac Oncol. 2016 Jul;11(7):1040-50
pubmed: 27013405
J Oncol Pract. 2017 Feb;13(2):e108-e119
pubmed: 27601506
Cancer Discov. 2017 Aug;7(8):818-831
pubmed: 28572459
Cancer Cell Int. 2010 Apr 30;10:13
pubmed: 20433758
JAMA Oncol. 2016 Nov 01;2(11):1452-1459
pubmed: 27273579
Mol Diagn Ther. 2015 Jun;19(3):169-77
pubmed: 25926090
Clin Cancer Res. 2012 Nov 15;18(22):6356-63
pubmed: 23014530
Oncogene. 2014 Jan 16;33(3):347-57
pubmed: 23318448
J Clin Oncol. 2009 Feb 20;27(6):986-93
pubmed: 19075281
J Clin Oncol. 2015 Jun 20;33(18):2084-91
pubmed: 25940718
N Engl J Med. 2009 Sep 3;361(10):947-57
pubmed: 19692680
J Oncol Pract. 2017 Apr;13(4):e353-e394
pubmed: 28326862
Anticancer Res. 2015 Dec;35(12):6819-27
pubmed: 26637902
Lancet Oncol. 2015 Oct;16(13):1324-34
pubmed: 26342236
Curr Oncol Rep. 2017 Apr;19(4):24
pubmed: 28303491
Nature. 2014 Jul 31;511(7511):543-50
pubmed: 25079552
Am Health Drug Benefits. 2015 Aug;8(Spec Issue):37
pubmed: 26380622
CA Cancer J Clin. 2018 Jan;68(1):7-30
pubmed: 29313949
Nat Med. 2014 Mar;20(3):251-4
pubmed: 24562383
Lancet Oncol. 2016 Dec;17(12):1653-1660
pubmed: 27825636
Curr Probl Cancer. 2017 May - Jun;41(3):182-193
pubmed: 28372823
J Thorac Oncol. 2015 Apr;10(4):655-64
pubmed: 25546556
Pathol Int. 2015 Nov;65(11):595-602
pubmed: 26345631
J Clin Oncol. 2018 Mar 20;36(9):841-849
pubmed: 28841389
Microsc Res Tech. 2002 Oct 1;59(1):68-83
pubmed: 12242698
J Clin Oncol. 2015 Nov 10;33(32):3817-25
pubmed: 26304871
JAMA. 2018 Aug 7;320(5):469-477
pubmed: 30088010
Oncol Rep. 2015 Jan;33(1):283-91
pubmed: 25370573
Oncologist. 2016 Jun;21(6):762-70
pubmed: 27245569
J Clin Pathw. 2018 Jan-Feb;4(1):49-54
pubmed: 31453358
J Clin Oncol. 2013 Sep 20;31(27):3327-34
pubmed: 23816960
Ann Oncol. 2015 Jul;26(7):1415-21
pubmed: 25922063
Clin Pharmacol Ther. 2015 May;97(5):447-50
pubmed: 25677079
JAMA. 2016 Oct 4;316(13):1355-1356
pubmed: 27467098
N Engl J Med. 2015 Aug 20;373(8):726-36
pubmed: 26287849
Eur Radiol. 2018 Feb;28(2):861-868
pubmed: 28786010
Clin Cancer Res. 2015 Apr 1;21(7):1514-24
pubmed: 25680375
J Natl Cancer Inst. 2015 Sep 15;107(11):
pubmed: 26378224
Cancer Discov. 2012 Oct;2(10):899-905
pubmed: 22877736
Oncotarget. 2017 Apr 18;8(16):26414-26423
pubmed: 28061482
Arch Pathol Lab Med. 2013 Jun;137(6):828-60
pubmed: 23551194
J Thorac Oncol. 2017 May;12(5):833-842
pubmed: 28167203
Arch Pathol Lab Med. 2018 Mar;142(3):321-346
pubmed: 29355391
Nature. 2016 Sep 07;537(7619):S63
pubmed: 27602743
Curr Probl Cancer. 2017 May - Jun;41(3):194-200
pubmed: 28343740
PLoS One. 2011;6(11):e28204
pubmed: 22140546
Oncogene. 2012 Sep 20;31(38):4255-6
pubmed: 22249247
Lancet Oncol. 2015 Aug;16(8):990-8
pubmed: 26159065
Lancet Oncol. 2017 Dec;18(12):1590-1599
pubmed: 29074098
JAMA. 2014 May 21;311(19):1998-2006
pubmed: 24846037
Cancer Res. 2014 May 1;74(9):2465-75
pubmed: 24788099
Asia Pac J Clin Oncol. 2017 Aug;13 Suppl 3:3-13
pubmed: 28795492
Oncotarget. 2018 Jan 30;9(21):15792-15815
pubmed: 29644010
Genome Med. 2017 Oct 30;9(1):89
pubmed: 29082853
Lancet. 2017 Jul 1;390(10089):29-39
pubmed: 28501140
N Engl J Med. 2016 Jul 7;375(1):83-4
pubmed: 27406352
Nat Rev Clin Oncol. 2015 Mar;12(3):132-4
pubmed: 25687910
Cancer Discov. 2015 Aug;5(8):842-9
pubmed: 25971939
N Engl J Med. 2016 Sep 29;375(13):1289-94
pubmed: 27682039
J Oncol Pract. 2016 Apr;12(4):339-83
pubmed: 26979926
Nat Genet. 2013 Jun;45(6):592-601
pubmed: 23644491
Clin Lung Cancer. 2017 Nov;18(6):651-659
pubmed: 28479369
Lancet Oncol. 2017 Oct;18(10):1307-1316
pubmed: 28919011
J Oncol Pract. 2016 Mar;12(3):261-6
pubmed: 26759491
Lancet Oncol. 2012 Mar;13(3):239-46
pubmed: 22285168