Chasing Synthetic Life: A Tale of Forms, Chemical Fossils, and Biomorphs.
artificial life
biomorphs
chemical fossils
morphogenesis
origins of life
Journal
Angewandte Chemie (International ed. in English)
ISSN: 1521-3773
Titre abrégé: Angew Chem Int Ed Engl
Pays: Germany
ID NLM: 0370543
Informations de publication
Date de publication:
04 05 2020
04 05 2020
Historique:
received:
11
12
2019
pubmed:
13
2
2020
medline:
26
3
2021
entrez:
13
2
2020
Statut:
ppublish
Résumé
This Essay focuses briefly on early studies elaborated by natural and chemical philosophers, and the once-called synthetic biologists, who postulated the transition from inanimate to animate matter and even foresaw the possibility of creating artificial life on the basis of physical and chemical principles only. Such ideas and speculations, ranging from soundness to weirdness, paved however the way to current developments in areas like abiotic pattern formation, cell compartmentalization, biomineralization, or the origin of life itself. In particular, the generation of biomorphs and their relationship to microfossils represents an active research domain and seems to be the logical way to bring the historical work up to the future, as some scientists are trying to make artificial cells. The last sections of this essay will also highlight modern science aimed at understanding what life is and, whether or not, it can be redefined in chemical terms.
Identifiants
pubmed: 32049403
doi: 10.1002/anie.201915853
doi:
Types de publication
Historical Article
Journal Article
Research Support, Non-U.S. Gov't
Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
7296-7304Informations de copyright
© 2020 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.
Références
N. Kitadai, S. Maruyama, Geosci. Front. 2018, 9, 1117-1153.
S. A. Benner, E. A. Bell, E. Biondi, R. Brasser, T. Carell, H.-J. Kim, S. J. Mojzsis, A. Omran, M. A. Pasek, D. Trail, ChemSystemsChem 2019, 1, e1900035.
J. W. Szostak, Angew. Chem. Int. Ed. 2017, 56, 11037-11043;
Angew. Chem. 2017, 129, 11182-11189.
S. Mann, Angew. Chem. Int. Ed. 2013, 52, 155-162;
Angew. Chem. 2013, 125, 166-173.
K. Powell, Nature 2018, 563, 172-175;
C. A. Hutchison III, R.-Y. Chuang, V. N. Noskov, N. Assad-Garcia, T. J. Deerinck, M. H. Ellisman, J. Gill, K. Kannan, B. J. Karas, L. Ma, J. F. Pelletier, Z.-Q. Qi, R. A. Richter, E. A. Strychalski, L. Sun, Y. Suzuki, B. Tsvetanova, K. S. Wise, H. O. Smith, J. I. Glass, C. Merryman, D. G. Gibson, J. C. Venter, Science 2016, 351, aad6253.
For an excellent overview, encompassing almost two centuries in the search for understanding the nature of life: E. F. Keller, Making Sense of Life. Explaining Biological Development with Models, Metaphors, and Machines, Harvard University Press, Cambridge, 2003.
For a historical perspective, from spontaneous generation to vitalism, and from prebiotic soups to genetic information: B. Mesler, H. J. Cleaves II, A Brief History of Creation. Science and the Search for the Origin of Life, W. W. Norton and Co., Inc., London, 2016.
J. R. Glauber, Furni Novi Philosophici/ Oder Beschreibung einer Neue erfundenen Distilir-Kunst: Auch was für Spiritus, Olea, Flores, und andere dergleichen Vegetabilische, Animalische, und Mineralische Medicamenten damit Können Zugerich und bereytet warden [New Philosophical Furnaces/ or Description of a new art of distillation: also by which spirits, oils, essences, and other vegetable, animal, and mineral medicaments can be prepared], Amsterdam, 1646.
M. Traube, Experimente zur Theorie der Zellenbildung und Endosmose in Archiv für Anatomie, Physiologie und wissenschafliche Medizin (Eds.: C. B. Reichert, E. du Bois-Reymond), Veit et Comp., Leipzig, 1867, pp. 87-165.
E. Haeckel, The History of Creation, Vol. 2, D. Appleton and Co., New York, 1892, Ch. 1, p. 414.
E. Haeckel, Kunstformer der Nature (1904), English version: Art Forms in Nature, Prestel, Munich, 1998;
For an analysis in retrospect: P. Ball, Nature 2007, 445, 486-487.
P. Harting, Q. J. Microscop. Sci. 1872, 12, 118-123. [Note: the currently available citation is: J. Cell Sci. 1872, s2-12, 118-123].
P. Ball, Shapes. Nature's Patterns-A Tapestry in Three Parts. I. Oxford University Press, Oxford, 2009, pp. 98-99.
G. A. Ozin, Acc. Chem. Res. 1997, 30, 17-27.
S. Tirard, Hist. Sci. Med. 2009, 43, 67-72 (in French).
S. Leduc, C. R. Acad. Sci. 1905, 141, 280-281.
S. Leduc, C. R. Acad. Sci. 1906, 143, 842-844.
S. Leduc, Les bases physiques de la vie et la biogenese, Masson, Paris, 1907, pp. 1-14.
S. Leduc, The Mechanism of Life (translated by W. Deane Butcher), Heineman, London (also published by Rebman Company, New York), 1911.
R. Clément, 2015, arXiv preprint arXiv:1512.03660v4[q-bio.OT].
A. Oparin, The Origin of Life, Dover, New York, 1938 (1956 edition), p. 56.
A. L. Herrera, La Plasmogenia. Nueva Ciencia del Origen de la Vida, Cuadernos de Cultura LXIX, Valencia, 1932;
A. L. Herrera, Science 1942, 96, 14.
D. W. Thompson, On Growth and Form, Cambridge University Press, Cambridge, 1917.
F. Jacob, La Logique du Vivant, Gallimard, Paris, 1970.
A. M. Turing, Philos. Trans. R. Soc. London B 1952, 237, 37-72.
S. Soh, M. Byrska, K. Kandere-Grzybowska, B. A. Grzybowski, Angew. Chem. Int. Ed. 2010, 49, 4170-4198;
Angew. Chem. 2010, 122, 4264-4294.
S. Weiner, J. Struct. Biol. 2008, 163, 229-234.
M. S. Kritsky, Appl. Biochem. Microbiol. 2005, 41, 316-318;
N. Raos, Bull. Hist. Chem. 2019, 44, 32-36.
J. H. E. Cartwright, J. M. García-Ruiz, M. L. Novella, F. Otálora, J. Colloid Interface Sci. 2002, 256, 351-359.
L. M. Barge, S. S. S. Cardoso, J. H. E. Cartwright, G. J. T. Cooper, L. Cronin, A. De Wit, I. J. Doloboff, B. Escribano, R. E. Goldstein, F. Haudin, D. E. H. Jones, A. L. Mackay, J. Maselko, J. J. Pagano, J. Pantaleone, M. J. Russell, C. I. Sainz-Díaz, O. Steinbock, D. A. Stone, Y. Tanimoto, N. L. Thomas, Chem. Rev. 2015, 115, 8652-8703.
C. Ritchie, G. J. T. Cooper, Y.-F. Song, C. Streb, H. Yin, A. D. C. Parenty, D. A. MacLaren, L. Cronin, Nat. Chem. 2009, 1, 47-52.
L. J. Points, G. J. T. Cooper, A. Dolbecq, P. Mialane, L. Cronin, Chem. Commun. 2016, 52, 1911-1914.
G. Pampalakis, Chem. Eur. J. 2016, 22, 6779-6782.
E. Nakouzi, O. Steinbock, Sci. Adv. 2016, 2, e1601144.
P. Pelcé, New Visions on Form and Growth. Fingered Growth, Dendrites, and Flames, Oxford University Press, Oxford, 2004.
For a recent overview: E. J. Javaux, Nature 2019, 572, 451-460.
J. M. García-Ruiz, S. T. Hyde, A. M. Carnerup, A. G. Christy, M. J. Van Kranendonk, N. J. Welham, Science 2003, 302, 1194-1197.
J. M. García-Ruiz, E. Melero-García, S. T. Hyde, Science 2009, 323, 362-365.
B. M. Bizzarri, L. Botta, M. I. Pérez-Valverde, R. Saladino, E. di Mauro, J. M. García-Ruiz, Chem. Eur. J. 2018, 24, 8126-8132;
R. Saladino, E. di Mauro, J. M. García-Ruiz, Chem. Eur. J. 2019, 25, 3181-3189.
J. M. García-Ruiz, E. Nakouzi, E. Kotopoulou, L. Tamborrino, O. Steinbock, Sci. Adv. 2017, 3, e1602285.
D. J. Des Marais, M. R. Walter, Astrobiology 2019, 19, 1419-1432.
D. Deamer, B. Damer, V. Kompanichenko, Astrobiology 2019, 19, 1523-1537.
J. M. García Ruiz, A. Carnerup, A. G. Christy, N. J. Welham, S. T. Hyde, Astrobiology 2002, 2, 353-369.
S. M. Gaines, G. Eglinton, J. Rullkötter, Echoes of Life. What Fossil Molecules Reveal about Earth History, Oxford University Press, Oxford, 2009, pp. 17-38.
N. Sánchez-Puig, E. Guerra-Flores, F. López-Sánchez, P. A. Juárez-Espinoza, R. Ruiz-Arellano, R. González-Muñoz, R. Arreguín-Espinosa, A. Moreno, J. Mater. Sci. 2012, 47, 2943-2950.
M. Cuéllar-Cruz, S. R. Islas, G. González, A. Moreno, Cryst. Growth Des. 2019, 19, 4667-4682.
W. L. Noorduin, A. Grinthal, L. Mahadevan, J. Aizenberg, Science 2013, 340, 832-837.
C. N. Kaplan, W. L. Noorduin, L. Li, R. Sadza, L. Folkertsma, J. Aizenberg, L. Mahadevan, Science 2017, 355, 1395-1399.
H. Bergson, Creative Evolution, Holt, New York, 1911, pp. 32-33.
F. J. Odling-Smee, K. N. Laland, M. W. Feldman, Niche Construction: The Neglected Process in Evolution, Princeton University Press, Princeton, 2003.
P. Cintas, ChemBioChem 2004, 5, 917-920.
For a special issue on synthetic biology: H. Mutschler, T. Robinson, T.-Y. D. Tang, S. Wegner, ChemBioChem 2019, 20, 2533-2534.
X. Cheng, J. E. Ferrell, Jr., Science 2019, 366, 631-637;
L. Xiang, Y. Yin, Y. Zheng, Y. Ma, Y. Li, Z. Zhao, J. Guo, Z. Ai, Y. Niu, K. Duan, J. He, S. Ren, D. Wu, Y. Bai, Z. Shang, X. Dai, W. Ji, T. Li, Nature 2020, 577, 537-542.
J. C. Blain, J. W. Szostak, Annu. Rev. Biochem. 2014, 83, 615-640.
C. Xu, S. Hu, X. Chen, Mater. Today 2016, 19, 516-532.