Ultrafast Backbone Protonation in Channelrhodopsin-1 Captured by Polarization Resolved Fs Vis-pump-IR-Probe Spectroscopy and Computational Methods.
QM/MM calculations
channelrhodopsin
counter-ion
optogenetics
photoisomerization
protein dynamics
proton back-transfer
proton transfer
retinal
vibrational spectroscopy
Journal
Molecules (Basel, Switzerland)
ISSN: 1420-3049
Titre abrégé: Molecules
Pays: Switzerland
ID NLM: 100964009
Informations de publication
Date de publication:
14 Feb 2020
14 Feb 2020
Historique:
received:
07
01
2020
revised:
03
02
2020
accepted:
12
02
2020
entrez:
21
2
2020
pubmed:
23
2
2020
medline:
20
11
2020
Statut:
epublish
Résumé
Channelrhodopsins (ChR) are light-gated ion-channels heavily used in optogenetics. Upon light excitation an ultrafast all-
Identifiants
pubmed: 32075128
pii: molecules25040848
doi: 10.3390/molecules25040848
pmc: PMC7070883
pii:
doi:
Substances chimiques
Channelrhodopsins
0
Protons
0
Rhodopsin
9009-81-8
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Deutsche Forschungsgemeinschaft
ID : 169703910
Organisme : Deutsche Forschungsgemeinschaft
ID : SFB 1078 B4, B7, Mercator fellowship
Organisme : H2020 European Research Council
ID : 678169 PhotoMutant
Références
J Am Chem Soc. 2009 Oct 21;131(41):14868-78
pubmed: 19778046
Front Mol Biosci. 2015 Jul 22;2:41
pubmed: 26258130
Science. 2017 Sep 15;357(6356):
pubmed: 28912215
J Phys Chem Lett. 2018 Dec 20;9(24):7180-7184
pubmed: 30525663
J Comput Chem. 2014 Jan 15;35(2):95-108
pubmed: 24122798
Science. 2005 Aug 5;309(5736):917-20
pubmed: 16081732
Biochim Biophys Acta. 2006 May-Jun;1757(5-6):395-400
pubmed: 16829226
J Biol Chem. 2015 May 15;290(20):12719-30
pubmed: 25802337
J Phys Chem B. 2006 Mar 9;110(9):4443-50
pubmed: 16509747
PLoS One. 2018 Aug 7;13(8):e0201298
pubmed: 30086158
J Phys Chem B. 2009 Jun 4;113(22):7851-60
pubmed: 19422251
Biochemistry. 2015 Jan 20;54(2):377-88
pubmed: 25469620
J Am Chem Soc. 2012 Jan 25;134(3):1408-11
pubmed: 22229806
J Mol Biol. 1993 Dec 5;234(3):779-815
pubmed: 8254673
FEBS Lett. 2014 Jun 27;588(14):2301-6
pubmed: 24859039
Science. 2018 Jul 13;361(6398):
pubmed: 29903883
J Am Chem Soc. 2016 Apr 13;138(14):4757-62
pubmed: 26999496
Nat Commun. 2019 Jul 18;10(1):3177
pubmed: 31320619
J Phys Chem Lett. 2019 Sep 19;10(18):5422-5427
pubmed: 31469573
J Am Chem Soc. 2007 Aug 8;129(31):9663-73
pubmed: 17636907
J Phys Chem B. 1998 Apr 30;102(18):3586-616
pubmed: 24889800
J Comput Chem. 2009 Jul 30;30(10):1545-614
pubmed: 19444816
Biophys J. 1990 Dec;58(6):1539-46
pubmed: 2275968
Annu Rev Plant Biol. 2008;59:167-89
pubmed: 18444900
Biophys J. 2005 Apr;88(4):2833-47
pubmed: 15653739
Proc Natl Acad Sci U S A. 2003 Dec 23;100(26):15304-9
pubmed: 14673090
Science. 2017 Nov 24;358(6366):
pubmed: 29170206
Struct Dyn. 2016 Apr 29;3(4):043208
pubmed: 27191011
J Phys Chem A. 2009 Oct 29;113(43):11856-65
pubmed: 19639948
Nat Commun. 2018 Sep 26;9(1):3949
pubmed: 30258177
Nucleic Acids Res. 2019 Jul 2;47(W1):W636-W641
pubmed: 30976793
J Am Chem Soc. 2013 May 8;135(18):6968-76
pubmed: 23537405
Photochem Photobiol. 2012 Jan-Feb;88(1):119-28
pubmed: 22044280
Nature. 2012 Jan 22;482(7385):369-74
pubmed: 22266941
Biochemistry. 2014 Jun 24;53(24):3961-70
pubmed: 24869998