Outbreak of
MALDI-TOF
Saprochaete
outbreak
whole-genome sequencing
yeast sepsi
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2020
2020
Historique:
received:
06
11
2019
accepted:
15
01
2020
entrez:
22
2
2020
pubmed:
23
2
2020
medline:
23
2
2020
Statut:
epublish
Résumé
New fungal species are increasingly reported in immunocompromised patients. We describe a cluster of seven MALDI-TOF MS-Vitek (bioMerieux, Marcy l'Etoile, France) failed to identify the six isolates, while SARAMIS (bioMerieux, Marcy l'Etoile, France) identified the isolates as The use of proteomics for identification and evaluation of strain clonality in outbreaks of rare pathogens is a promising alternative to laborious and time-consuming molecular methods, even if molecular whole-genome sequencing (WGS) typing will still remain the reference method for rare emergent pathogens.
Identifiants
pubmed: 32082293
doi: 10.3389/fmicb.2020.00084
pmc: PMC7004961
doi:
Types de publication
Journal Article
Langues
eng
Pagination
84Informations de copyright
Copyright © 2020 Lo Cascio, Vincenzi, Soldani, De Carolis, Maccacaro, Sorrentino, Nadali, Cesaro, Sommavilla, Niero, Naso, Grancini, Azzini, Sanguinetti, Tacconelli and Cornaglia.
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