Modeling of the Coral Microbiome: the Influence of Temperature and Microbial Network.
host-microbe
metagenomics
microbial communities
Journal
mBio
ISSN: 2150-7511
Titre abrégé: mBio
Pays: United States
ID NLM: 101519231
Informations de publication
Date de publication:
03 03 2020
03 03 2020
Historique:
entrez:
5
3
2020
pubmed:
5
3
2020
medline:
20
3
2021
Statut:
epublish
Résumé
Host-associated microbial communities are shaped by extrinsic and intrinsic factors to the holobiont organism. Environmental factors and microbe-microbe interactions act simultaneously on the microbial community structure, making the microbiome dynamics challenging to predict. The coral microbiome is essential to the health of coral reefs and sensitive to environmental changes. Here, we develop a dynamic model to determine the microbial community structure associated with the surface mucus layer (SML) of corals using temperature as an extrinsic factor and microbial network as an intrinsic factor. The model was validated by comparing the predicted relative abundances of microbial taxa to the relative abundances of microbial taxa from the sample data. The SML microbiome from
Identifiants
pubmed: 32127450
pii: mBio.02691-19
doi: 10.1128/mBio.02691-19
pmc: PMC7064765
pii:
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NIGMS NIH HHS
ID : T32 GM128596
Pays : United States
Informations de copyright
Copyright © 2020 Lima et al.
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