iTAG-RNA Isolates Cell-Specific Transcriptional Responses to Environmental Stimuli and Identifies an RNA-Based Endocrine Axis.
Adipose Tissue
/ metabolism
Animals
Cell-Free Nucleic Acids
/ blood
Cellular Reprogramming
/ genetics
Chemical Precipitation
Cytochrome P-450 CYP3A
/ metabolism
Deoxyuridine
/ analogs & derivatives
Diet, High-Fat
Endocrine System
/ metabolism
Environment
Hepatocytes
/ metabolism
Homeostasis
Lipid Metabolism
/ genetics
Liver
/ metabolism
Mass Spectrometry
Mice
Muscle, Skeletal
/ metabolism
Organ Specificity
Prodrugs
/ chemistry
RNA
/ blood
Reproducibility of Results
Small Molecule Libraries
/ chemistry
Staining and Labeling
Transcription, Genetic
RNA tagging, mouse genetics, circulating RNA, 5EU prodrug, epigenetics, RNA biomarker
Journal
Cell reports
ISSN: 2211-1247
Titre abrégé: Cell Rep
Pays: United States
ID NLM: 101573691
Informations de publication
Date de publication:
03 03 2020
03 03 2020
Historique:
received:
18
06
2019
revised:
06
12
2019
accepted:
05
02
2020
entrez:
5
3
2020
pubmed:
5
3
2020
medline:
25
3
2021
Statut:
ppublish
Résumé
Biofluids contain various circulating cell-free RNAs (ccfRNAs). The composition of these ccfRNAs varies among biofluids. They constitute tantalizing biomarker candidates for several pathologies and have been demonstrated to be mediators of cellular communication. Little is known about their function in physiological and developmental settings, and most works are limited to in vitro studies. Here, we develop iTAG-RNA, a method for the unbiased tagging of RNA transcripts in mice in vivo. We use iTAG-RNA to isolate hepatocytes and kidney proximal epithelial cell-specific transcriptional responses to a dietary challenge without interfering with the tissue architecture and to identify multiple hepatocyte-secreted ccfRNAs in plasma. We also identify specific transfer of liver-derived ccfRNAs to adipose tissue and skeletal muscle, where they likely constitute a buffering system to maintain lipid homeostasis under acute high-fat-diet feeding. Our findings directly demonstrate in vivo transfer of RNAs between tissues and highlight its implications for endocrine signaling and homeostasis.
Identifiants
pubmed: 32130917
pii: S2211-1247(20)30174-1
doi: 10.1016/j.celrep.2020.02.020
pii:
doi:
Substances chimiques
Cell-Free Nucleic Acids
0
Prodrugs
0
Small Molecule Libraries
0
RNA
63231-63-0
Cytochrome P-450 CYP3A
EC 1.14.14.1
5-ethynyl-2'-deoxyuridine
G373S00W2J
Deoxyuridine
W78I7AY22C
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
3183-3194.e4Informations de copyright
Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Interests The authors declare no competing interests.