Thermal proteome profiling for interrogating protein interactions.


Journal

Molecular systems biology
ISSN: 1744-4292
Titre abrégé: Mol Syst Biol
Pays: England
ID NLM: 101235389

Informations de publication

Date de publication:
03 2020
Historique:
received: 13 09 2019
revised: 15 01 2020
accepted: 27 01 2020
entrez: 6 3 2020
pubmed: 7 3 2020
medline: 4 2 2021
Statut: ppublish

Résumé

Thermal proteome profiling (TPP) is based on the principle that, when subjected to heat, proteins denature and become insoluble. Proteins can change their thermal stability upon interactions with small molecules (such as drugs or metabolites), nucleic acids or other proteins, or upon post-translational modifications. TPP uses multiplexed quantitative mass spectrometry-based proteomics to monitor the melting profile of thousands of expressed proteins. Importantly, this approach can be performed in vitro, in situ, or in vivo. It has been successfully applied to identify targets and off-targets of drugs, or to study protein-metabolite and protein-protein interactions. Therefore, TPP provides a unique insight into protein state and interactions in their native context and at a proteome-wide level, allowing to study basic biological processes and their underlying mechanisms.

Identifiants

pubmed: 32133759
doi: 10.15252/msb.20199232
pmc: PMC7057112
doi:

Substances chimiques

Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

e9232

Informations de copyright

© 2020 The Authors. Published under the terms of the CC BY 4.0 license.

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Auteurs

André Mateus (A)

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

Nils Kurzawa (N)

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Faculty of Biosciences, EMBL and Heidelberg University, Heidelberg, Germany.

Isabelle Becher (I)

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

Sindhuja Sridharan (S)

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

Dominic Helm (D)

Proteomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.

Frank Stein (F)

Proteomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.

Athanasios Typas (A)

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

Mikhail M Savitski (MM)

Genome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.

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Classifications MeSH