Identification and phylogenetic characterization of bovine ephemeral fever virus (BEFV) of Middle Eastern lineage associated with 2018-2019 outbreaks in India.
India
bovine ephemeral fever virus
outbreak
phylogenetic analysis
rhabdoviruses
synonymous and non-synonymous mutations
Journal
Transboundary and emerging diseases
ISSN: 1865-1682
Titre abrégé: Transbound Emerg Dis
Pays: Germany
ID NLM: 101319538
Informations de publication
Date de publication:
Sep 2020
Sep 2020
Historique:
revised:
22
02
2020
received:
06
01
2020
accepted:
25
02
2020
medline:
8
3
2020
pubmed:
8
3
2020
entrez:
8
3
2020
Statut:
ppublish
Résumé
Bovine ephemeral fever virus (BEFV) is an evolving arbovirus reported across tropical, subtropical and temperate climatic zones globally. This study reveals prominent BEFV outbreaks in India, emerging annually during monsoons in subtropical areas accompanied by a congenial abundance of the vector population. PCR-based detection of viral genomic RNA in the blood samples collected during outbreaks of 2018-2019 for the first time confirmed the presence of BEFV in India. Phylogenetic analysis based on the glycoprotein gene of BEFV showed the current isolates to have high sequence homology with Middle Eastern lineage with nearly 97%, identity to Turkey (BEFV Ad12/TUR) and Israel (Israel 2006) isolates.
Banques de données
GENBANK
['KY012742', 'MN078236', 'KY315724', 'AY954459', 'MH105227', 'AF234533', 'MH756623', 'MH105241', 'MN148800', 'MN839987', 'MH933865', 'MH933864', 'MH933863', 'MN688612', 'MN781182', 'MN781183', 'MN734441', 'MN734442', 'MN734443']
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
2226-2232Subventions
Organisme : Science and Engineering Research Board, Govt of India
ID : ECR/2016/000130
Informations de copyright
© 2020 Blackwell Verlag GmbH.
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