Metagenomics for taxonomy profiling: tools and approaches.

deoxyribonucleic acid genomics metagenomics microbial metagenomes ribose nucleic acid

Journal

Bioengineered
ISSN: 2165-5987
Titre abrégé: Bioengineered
Pays: United States
ID NLM: 101581063

Informations de publication

Date de publication:
12 2020
Historique:
entrez: 10 3 2020
pubmed: 10 3 2020
medline: 15 12 2020
Statut: ppublish

Résumé

The study of metagenomics is an emerging field that identifies the total genetic materials in an organism along with the set of all genetic materials like deoxyribonucleic acid and ribose nucleic acid, which play a key role with the maintenance of cellular functions. The best part of this technology is that it gives more flexibility to environmental microbiologists to instantly pioneer the immense genetic variability of microbial communities. However, it is intensively complex to identify the suitable sequencing measures of any specific gene that can exclusively indicate the involvement of microbial metagenomes and be able to advance valuable results about these communities. This review provides an overview of the metagenomic advancement that has been advantageous for aggregation of more knowledge about specific genes, microbial communities and its metabolic pathways. More specific drawbacks of metagenomes technology mainly depend on sequence-based analysis. Therefore, this 'targeted based metagenomics' approach will give comprehensive knowledge about the ecological, evolutionary and functional sequence of significantly important genes that naturally exist in living beings either human, animal and microorganisms from distinctive ecosystems.

Identifiants

pubmed: 32149573
doi: 10.1080/21655979.2020.1736238
pmc: PMC7161568
doi:

Substances chimiques

Nucleic Acids 0
DNA 9007-49-2

Types de publication

Journal Article Retracted Publication

Langues

eng

Sous-ensembles de citation

IM

Pagination

356-374

Commentaires et corrections

Type : RetractionIn

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Auteurs

Mukesh Kumar Awasthi (M)

College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province, China.
Swedish Centre for Resource Recovery, University of Borås, Borås, Sweden.

B Ravindran (B)

Department of Environmental Energy and Engineering, Kyonggi University Youngtong-Gu, Suwon, South Korea.

Surendra Sarsaiya (S)

Key Laboratory of Basic Pharmacology of Ministry of Education, Zunyi Medical University, Zunyi, Guizhou, China.

Hongyu Chen (H)

Institute of Biology, Freie Universität Berlin Altensteinstr, Berlin, Germany.

Steven Wainaina (S)

Swedish Centre for Resource Recovery, University of Borås, Borås, Sweden.

Ekta Singh (E)

CSIR-National Environmental Engineering Research Institute, Nagpur, India.

Tao Liu (T)

College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province, China.

Sunil Kumar (S)

CSIR-National Environmental Engineering Research Institute, Nagpur, India.

Ashok Pandey (A)

Centre for Innovation and Translational Research CSIR-Indian Institute of Toxicology Research, Lucknow, India.

Lal Singh (L)

CSIR-National Environmental Engineering Research Institute, Nagpur, India.

Zengqiang Zhang (Z)

College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi Province, China.

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