DePicT Melanoma Deep-CLASS: a deep convolutional neural networks approach to classify skin lesion images.

Case-based reasoning Classification Deep learning Early detection Information retrieval Melanoma Skin cancer

Journal

BMC bioinformatics
ISSN: 1471-2105
Titre abrégé: BMC Bioinformatics
Pays: England
ID NLM: 100965194

Informations de publication

Date de publication:
11 Mar 2020
Historique:
entrez: 14 3 2020
pubmed: 14 3 2020
medline: 3 6 2020
Statut: epublish

Résumé

Melanoma results in the vast majority of skin cancer deaths during the last decades, even though this disease accounts for only one percent of all skin cancers' instances. The survival rates of melanoma from early to terminal stages is more than fifty percent. Therefore, having the right information at the right time by early detection with monitoring skin lesions to find potential problems is essential to surviving this type of cancer. An approach to classify skin lesions using deep learning for early detection of melanoma in a case-based reasoning (CBR) system is proposed. This approach has been employed for retrieving new input images from the case base of the proposed system DePicT Melanoma Deep-CLASS to support users with more accurate recommendations relevant to their requested problem (e.g., image of affected area). The efficiency of our system has been verified by utilizing the ISIC Archive dataset in analysis of skin lesion classification as a benign and malignant melanoma. The kernel of DePicT Melanoma Deep-CLASS is built upon a convolutional neural network (CNN) composed of sixteen layers (excluding input and ouput layers), which can be recursively trained and learned. Our approach depicts an improved performance and accuracy in testing on the ISIC Archive dataset. Our methodology derived from a deep CNN, generates case representations for our case base to use in the retrieval process. Integration of this approach to DePicT Melanoma CLASS, significantly improving the efficiency of its image classification and the quality of the recommendation part of the system. The proposed method has been tested and validated on 1796 dermoscopy images. Analyzed results indicate that it is efficient on malignancy detection.

Sections du résumé

BACKGROUND BACKGROUND
Melanoma results in the vast majority of skin cancer deaths during the last decades, even though this disease accounts for only one percent of all skin cancers' instances. The survival rates of melanoma from early to terminal stages is more than fifty percent. Therefore, having the right information at the right time by early detection with monitoring skin lesions to find potential problems is essential to surviving this type of cancer.
RESULTS RESULTS
An approach to classify skin lesions using deep learning for early detection of melanoma in a case-based reasoning (CBR) system is proposed. This approach has been employed for retrieving new input images from the case base of the proposed system DePicT Melanoma Deep-CLASS to support users with more accurate recommendations relevant to their requested problem (e.g., image of affected area). The efficiency of our system has been verified by utilizing the ISIC Archive dataset in analysis of skin lesion classification as a benign and malignant melanoma. The kernel of DePicT Melanoma Deep-CLASS is built upon a convolutional neural network (CNN) composed of sixteen layers (excluding input and ouput layers), which can be recursively trained and learned. Our approach depicts an improved performance and accuracy in testing on the ISIC Archive dataset.
CONCLUSIONS CONCLUSIONS
Our methodology derived from a deep CNN, generates case representations for our case base to use in the retrieval process. Integration of this approach to DePicT Melanoma CLASS, significantly improving the efficiency of its image classification and the quality of the recommendation part of the system. The proposed method has been tested and validated on 1796 dermoscopy images. Analyzed results indicate that it is efficient on malignancy detection.

Identifiants

pubmed: 32164530
doi: 10.1186/s12859-020-3351-y
pii: 10.1186/s12859-020-3351-y
pmc: PMC7068864
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

84

Références

Nature. 2017 Jun 28;546(7660):686
pubmed: 28658222
PLoS One. 2018 Mar 7;13(3):e0193321
pubmed: 29513718
Sensors (Basel). 2018 Feb 11;18(2):
pubmed: 29439500
J Natl Compr Canc Netw. 2016 Aug;14(8):945-58
pubmed: 27496110
Sci Data. 2018 Aug 14;5:180161
pubmed: 30106392
IEEE J Biomed Health Inform. 2019 Mar;23(2):547-559
pubmed: 29994788
Annu Int Conf IEEE Eng Med Biol Soc. 2014;2014:6748-51
pubmed: 25571545

Auteurs

Sara Nasiri (S)

Department of Electrical Engineering and Computer Science, University of Siegen, Hölderlinstr. 3, Siegen, Germany. sara.nasiri@uni-siegen.de.

Julien Helsper (J)

Department of Electrical Engineering and Computer Science, University of Siegen, Hölderlinstr. 3, Siegen, Germany.

Matthias Jung (M)

Department of Electrical Engineering and Computer Science, University of Siegen, Hölderlinstr. 3, Siegen, Germany.

Madjid Fathi (M)

Department of Electrical Engineering and Computer Science, University of Siegen, Hölderlinstr. 3, Siegen, Germany.

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