Defocused imaging exploits supercritical-angle fluorescence emission for precise axial single molecule localization microscopy.


Journal

Biomedical optics express
ISSN: 2156-7085
Titre abrégé: Biomed Opt Express
Pays: United States
ID NLM: 101540630

Informations de publication

Date de publication:
01 Feb 2020
Historique:
received: 16 08 2019
revised: 11 12 2019
accepted: 11 12 2019
entrez: 25 3 2020
pubmed: 25 3 2020
medline: 25 3 2020
Statut: epublish

Résumé

Single molecule localization microscopy (SMLM) is one of the key techniques that break the classical resolution limit in optical imaging. It is based on taking multiple recordings of a sample, each showing only a sparse arrangement of spatially well separated fluorescent molecules which can be localized at nanometer precision. While localizing along the lateral directions is usually straightforward, estimating axial positions at a comparable precision is known to be much harder, which is due to the relatively large depth of focus provided by the microscope optics. Whenever a molecule is sufficiently close to the coverslip, it becomes feasible to draw additional information from near field coupling effects: super-critical angle fluorescence (SAF) appears and can be exploited to boost the axial localization precision. Here we propose defocused imaging as a SMLM strategy that is capable of leveraging the information contained in SAF. We show that, regarding axial localization precision, our approach is superior to established SAF-based approaches. At the same time it is simple and can be conducted on any research-grade microscope where controlled defocusing on the order of a few hundred nanometers is possible.

Identifiants

pubmed: 32206395
doi: 10.1364/BOE.375678
pii: 375678
pmc: PMC7041438
doi:

Types de publication

Journal Article

Langues

eng

Pagination

775-790

Subventions

Organisme : Austrian Science Fund FWF
ID : P 30214
Pays : Austria

Commentaires et corrections

Type : ErratumIn

Informations de copyright

Published by The Optical Society under the terms of the Creative Commons Attribution 4.0 License. Further distribution of this work must maintain attribution to the author(s) and the published article’s title, journal citation, and DOI.

Déclaration de conflit d'intérêts

The authors declare that there are no conflicts of interest related to this article.

Références

J Biomed Opt. 2001 Jan;6(1):6-13
pubmed: 11178575
Nat Methods. 2014 Mar;11(3):253-66
pubmed: 24577276
Science. 2008 Feb 8;319(5864):810-3
pubmed: 18174397
Opt Express. 2004 Sep 6;12(18):4246-54
pubmed: 19483970
Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19087-92
pubmed: 23129640
Opt Express. 2014 Nov 17;22(23):29081-91
pubmed: 25402146
Biophys J. 2004 Feb;86(2):1185-200
pubmed: 14747353
Opt Express. 2009 Apr 13;17(8):6829-48
pubmed: 19365511
Nat Commun. 2019 Apr 30;10(1):1980
pubmed: 31040275
Opt Express. 2018 Dec 10;26(25):33166-33179
pubmed: 30645473
Science. 2006 Sep 15;313(5793):1642-5
pubmed: 16902090
Anal Chem. 2000 May 1;72(9):2117-23
pubmed: 10815974
Nat Methods. 2017 Jan;14(1):41-44
pubmed: 27869814
Nat Methods. 2010 May;7(5):377-81
pubmed: 20364147
Nat Methods. 2008 Jun;5(6):527-9
pubmed: 18469823
IEEE Trans Nanobioscience. 2004 Dec;3(4):237-42
pubmed: 15631134
Opt Lett. 2003 Jan 15;28(2):69-71
pubmed: 12656488
J Microsc. 2012 Aug;247(2):147-60
pubmed: 22612666
Opt Lett. 2003 Jun 1;28(11):941-3
pubmed: 12816253
J Opt Soc Am A Opt Image Sci Vis. 2016 Jul 1;33(7):B36-57
pubmed: 27409706
Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3125-30
pubmed: 19202073
Bioinformatics. 2014 Aug 15;30(16):2389-90
pubmed: 24771516
Methods. 2020 Mar 1;174:20-26
pubmed: 30946895
Light Sci Appl. 2018 Dec 5;7:99
pubmed: 30534368
Angew Chem Int Ed Engl. 2008;47(33):6172-6
pubmed: 18646237
Biophys J. 2006 Dec 1;91(11):4258-72
pubmed: 16980368
Opt Lett. 2011 Aug 15;36(16):3051-3
pubmed: 21847156
ACS Nano. 2017 Dec 26;11(12):11839-11846
pubmed: 28921961
Nat Methods. 2006 Oct;3(10):793-5
pubmed: 16896339
Opt Lett. 2014 Feb 1;39(3):555-8
pubmed: 24487864
Opt Express. 2008 Dec 22;16(26):22048-57
pubmed: 19104639
Phys Rev Lett. 2012 May 25;108(21):218101
pubmed: 23003303
Nat Methods. 2018 Jun;15(6):449-454
pubmed: 29713082

Auteurs

Philipp Zelger (P)

Division for Biomedical Physics, Medical University of Innsbruck, Müllerstraße 44, 6020 Innsbruck, Austria.

Lisa Bodner (L)

Division for Biomedical Physics, Medical University of Innsbruck, Müllerstraße 44, 6020 Innsbruck, Austria.

Lukas Velas (L)

Institute of Applied Physics, TU Wien, Getreidemarkt 9, 1060 Vienna, Austria.

Gerhard J Schütz (GJ)

Institute of Applied Physics, TU Wien, Getreidemarkt 9, 1060 Vienna, Austria.

Alexander Jesacher (A)

Division for Biomedical Physics, Medical University of Innsbruck, Müllerstraße 44, 6020 Innsbruck, Austria.

Classifications MeSH