Low Long Terminal Repeat (LTR)-Retrotransposon Expression in Leaves of the Marine Phanerogam

Illumina RNA-seq LTR-retrotransposons Posidonia oceanica retrotransposon expression seagrasses

Journal

Life (Basel, Switzerland)
ISSN: 2075-1729
Titre abrégé: Life (Basel)
Pays: Switzerland
ID NLM: 101580444

Informations de publication

Date de publication:
24 Mar 2020
Historique:
received: 24 02 2020
revised: 14 03 2020
accepted: 21 03 2020
entrez: 28 3 2020
pubmed: 28 3 2020
medline: 28 3 2020
Statut: epublish

Résumé

Seagrasses as

Identifiants

pubmed: 32213979
pii: life10030030
doi: 10.3390/life10030030
pmc: PMC7151569
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : University of Pisa
ID : Plantomics

Références

Plant Physiol. 2001 Mar;125(3):1283-92
pubmed: 11244109
Trends Plant Sci. 2010 Aug;15(8):471-8
pubmed: 20541961
Mol Ecol. 2015 May;24(10):2336-48
pubmed: 25819368
Nat Rev Genet. 2013 Jan;14(1):49-61
pubmed: 23247435
Mol Ecol. 2017 Aug;26(16):4241-4259
pubmed: 28614601
Plant Cell. 2012 Mar;24(3):1242-55
pubmed: 22427337
Plant Physiol. 2013 May;162(1):440-55
pubmed: 23478895
Genome Res. 2007 Jul;17(7):1072-81
pubmed: 17556529
Plant J. 2013 Oct;76(2):175-87
pubmed: 23855972
Plant Mol Biol. 2000 Jan;42(1):251-69
pubmed: 10688140
Front Plant Sci. 2017 Jun 29;8:1142
pubmed: 28706528
Genetica. 2020 Feb;148(1):13-23
pubmed: 31960179
Mob DNA. 2019 Jul 17;10:30
pubmed: 31346350
BMC Plant Biol. 2009 Dec 23;9:150
pubmed: 20030800
Genome Res. 2001 Oct;11(10):1660-76
pubmed: 11591643
PLoS Genet. 2009 Nov;5(11):e1000734
pubmed: 19956538
Nature. 2016 Feb 18;530(7590):331-5
pubmed: 26814964
Genes (Basel). 2018 Aug 29;9(9):
pubmed: 30158460
Theor Appl Genet. 2004 Jun;109(1):200-9
pubmed: 15071728
Proc Natl Acad Sci U S A. 2005 Feb 22;102(8):2826-31
pubmed: 15710890
Bioinformatics. 2014 May 1;30(9):1236-40
pubmed: 24451626
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Nat Genet. 1998 Sep;20(1):43-5
pubmed: 9731528
PLoS One. 2019 Feb 19;14(2):e0212371
pubmed: 30779767
Proteins. 1997 Jul;28(3):405-20
pubmed: 9223186
Mar Genomics. 2015 Dec;24 Pt 3:397-404
pubmed: 26472701
BMC Genomics. 2015 Jul 22;16:538
pubmed: 26194356
Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12377-81
pubmed: 19587236
Front Plant Sci. 2017 Aug 14;8:1417
pubmed: 28855915
Mol Genet Genomics. 2001 Apr;265(2):336-44
pubmed: 11361345
Gene. 2017 Nov 15;634:5-14
pubmed: 28867564
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Nat Rev Genet. 2007 Apr;8(4):272-85
pubmed: 17363976
BMC Bioinformatics. 2008 Jan 14;9:18
pubmed: 18194517
Sci Data. 2016 Dec 20;3:160115
pubmed: 27996971
Trends Ecol Evol. 2016 Jul;31(7):514-526
pubmed: 27080578
Plant Cell Rep. 2008 Mar;27(3):499-507
pubmed: 18026732
Plant Physiol. 2015 Jan;167(1):11-24
pubmed: 25371551
Oecologia. 2007 Aug;153(2):431-40
pubmed: 17415591
Plant Physiol. 2014 Feb;164(2):671-82
pubmed: 24376281
Plant Cell. 1999 Sep;11(9):1769-1784
pubmed: 10488242
Genomics. 2020 Mar;112(2):1611-1621
pubmed: 31605729
Brief Funct Genomics. 2014 Jul;13(4):276-95
pubmed: 24681749
Gene. 2013 Apr 15;518(2):256-61
pubmed: 23370337
Gigascience. 2018 Apr 1;7(4):1-14
pubmed: 29659812
Nat Genet. 2003 Jan;33(1):102-6
pubmed: 12483211
Proc Natl Acad Sci U S A. 2004 Jun 15;101(24):8998-9002
pubmed: 15184681
Genome Res. 2006 Oct;16(10):1252-61
pubmed: 16954538
BMC Genomics. 2017 Aug 18;18(1):634
pubmed: 28821238
Mob DNA. 2019 Jan 3;10:1
pubmed: 30622655
Bioinformatics. 2003 Aug 12;19(12):1477-83
pubmed: 12912827
Nat Rev Genet. 2007 Dec;8(12):973-82
pubmed: 17984973

Auteurs

Alberto Vangelisti (A)

Department of Agriculture, Food and Environmental Sciences, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy.

Flavia Mascagni (F)

Department of Agriculture, Food and Environmental Sciences, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy.

Gabriele Usai (G)

Department of Agriculture, Food and Environmental Sciences, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy.

Lucia Natali (L)

Department of Agriculture, Food and Environmental Sciences, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy.

Tommaso Giordani (T)

Department of Agriculture, Food and Environmental Sciences, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy.

Andrea Cavallini (A)

Department of Agriculture, Food and Environmental Sciences, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy.

Classifications MeSH