The shell matrix of the european thorny oyster, Spondylus gaederopus: microstructural and molecular characterization.

Biomineralization Evolution Liquid chromatography-tandem mass spectrometry Proteomics Shell biochemistry

Journal

Journal of structural biology
ISSN: 1095-8657
Titre abrégé: J Struct Biol
Pays: United States
ID NLM: 9011206

Informations de publication

Date de publication:
01 07 2020
Historique:
received: 27 01 2020
revised: 20 03 2020
accepted: 22 03 2020
pubmed: 30 3 2020
medline: 3 8 2021
entrez: 30 3 2020
Statut: ppublish

Résumé

Molluscs, the largest marine phylum, display extraordinary shell diversity and sophisticated biomineral architectures. However, mineral-associated biomolecules involved in biomineralization are still poorly characterised. We report the first comprehensive structural and biomolecular study of Spondylus gaederopus, a pectinoid bivalve with a peculiar shell texture. Used since prehistoric times, this is the best-known shell of Europe's cultural heritage. We find that Spondylus microstructure is very poor in mineral-bound organics, which are mostly intercrystalline and concentrated at the interface between structural layers. Using high-resolution liquid chromatography tandem mass spectrometry (LC-MS/MS) we characterized several shell protein fractions, isolated following different bleaching treatments. Several peptides were identified as well as six shell proteins, which display features and domains typically found in biomineralized tissues, including the prevalence of intrinsically disordered regions. It is very likely that these sequences only partially represent the full proteome of Spondylus, considering the lack of genomics data for this genus and the fact that most of the reconstructed peptides do not match with any known shell proteins, representing consequently lineage-specific sequences. This work sheds light onto the shell matrix involved in the biomineralization in spondylids. Our proteomics data suggest that Spondylus has evolved a shell-forming toolkit, distinct from that of other better studied pectinoids - fine-tuned to produce shell structures with high mechanical properties, while limited in organic content. This study therefore represents an important milestone for future studies on biomineralized skeletons and provides the first reference dataset for forthcoming molecular studies of Spondylus archaeological artifacts.

Identifiants

pubmed: 32220629
pii: S1047-8477(20)30063-0
doi: 10.1016/j.jsb.2020.107497
pii:
doi:

Substances chimiques

Minerals 0
Proteome 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

107497

Informations de copyright

Copyright © 2020 Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Jorune Sakalauskaite (J)

Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, 10123 Turin, Italy; Biogeosciences, UMR CNRS 6282, University of Burgundy-Franche-Comté (UBFC), 6 Boulevard Gabriel, 21000 Dijon, France. Electronic address: jorune.sakalauskaite@unito.it.

Laurent Plasseraud (L)

Institute of Molecular Chemistry, ICMUB UMR CNRS 6302, University of Burgundy-Franche-Comté (UBFC), 9 Avenue Alain Savary, 21000 Dijon, France.

Jérôme Thomas (J)

Biogeosciences, UMR CNRS 6282, University of Burgundy-Franche-Comté (UBFC), 6 Boulevard Gabriel, 21000 Dijon, France.

Marie Albéric (M)

Laboratoire Chimie de la Matière Condensée de Paris, UMR, CNRS 7574, Sorbonne Université, Place Jussieu 4, 75252 Paris, France.

Mathieu Thoury (M)

IPANEMA, CNRS, ministère de la Culture, UVSQ, USR3461, Université Paris-Saclay, F-91192 Gif-sur-Yvette, France.

Jonathan Perrin (J)

Synchrotron SOLEIL, L'Orme des Merisiers, 91192 Gif sur Yvette Cedex, France.

Frédéric Jamme (F)

Synchrotron SOLEIL, L'Orme des Merisiers, 91192 Gif sur Yvette Cedex, France.

Cédric Broussard (C)

3P5 Proteomic Platform, University of Paris, Cochin Institute, INSERM, U1016, CNRS, UMR8104, F-75014 Paris, France.

Beatrice Demarchi (B)

Department of Life Sciences and Systems Biology, University of Turin, Via Accademia Albertina 13, 10123 Turin, Italy.

Frédéric Marin (F)

Biogeosciences, UMR CNRS 6282, University of Burgundy-Franche-Comté (UBFC), 6 Boulevard Gabriel, 21000 Dijon, France. Electronic address: frederic.marin@u-bourgogne.fr.

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Classifications MeSH