Deep ensemble learning for Alzheimer's disease classification.

Alzheimer's disease Classification Deep learning Ensemble learning Stacking

Journal

Journal of biomedical informatics
ISSN: 1532-0480
Titre abrégé: J Biomed Inform
Pays: United States
ID NLM: 100970413

Informations de publication

Date de publication:
05 2020
Historique:
received: 29 05 2019
revised: 29 02 2020
accepted: 23 03 2020
pubmed: 3 4 2020
medline: 29 7 2021
entrez: 3 4 2020
Statut: ppublish

Résumé

Ensemble learning uses multiple algorithms to obtain better predictive performance than any single one of its constituent algorithms could. With the growing popularity of deep learning technologies, researchers have started to ensemble these technologies for various purposes. Few, if any, however, have used the deep learning approach as a means to ensemble Alzheimer's disease classification algorithms. This paper presents a deep ensemble learning framework that aims to harness deep learning algorithms to integrate multisource data and tap the 'wisdom of experts'. At the voting layer, two sparse autoencoders are trained for feature learning to reduce the correlation of attributes and diversify the base classifiers ultimately. At the stacking layer, a nonlinear feature-weighted method based on a deep belief network is proposed to rank the base classifiers, which may violate the conditional independence. The neural network is used as a meta classifier. At the optimizing layer, over-sampling and threshold-moving are used to cope with the cost-sensitive problem. Optimized predictions are obtained based on an ensemble of probabilistic predictions by similarity calculation. The proposed deep ensemble learning framework is used for Alzheimer's disease classification. Experiments with the clinical dataset from National Alzheimer's Coordinating Center demonstrate that the classification accuracy of our proposed framework is 4% better than six well-known ensemble approaches, including the standard stacking algorithm as well. Adequate coverage of more accurate diagnostic services can be provided by utilizing the wisdom of averaged physicians. This paper points out a new way to boost the primary care of Alzheimer's disease from the view of machine learning.

Identifiants

pubmed: 32234546
pii: S1532-0464(20)30039-3
doi: 10.1016/j.jbi.2020.103411
pmc: PMC9760486
mid: NIHMS1847542
pii:
doi:

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

103411

Subventions

Organisme : NIA NIH HHS
ID : R01 AG054076
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005142
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG016573
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG047266
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG010161
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG025688
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005133
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005138
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG047366
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG010129
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG019610
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG033514
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG013854
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG053760
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG066444
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG010124
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG023501
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005131
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG010133
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG016574
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005146
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG035982
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG008702
Pays : United States
Organisme : NIA NIH HHS
ID : U01 AG016976
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG008051
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005681
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG013846
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG047270
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005136
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG072973
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG049638
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG012300
Pays : United States
Organisme : NIA NIH HHS
ID : P50 AG005134
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG008017
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG066514
Pays : United States
Organisme : NIA NIH HHS
ID : P30 AG028383
Pays : United States

Informations de copyright

Copyright © 2020 Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Références

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Auteurs

Ning An (N)

Key Laboratory of Knowledge Engineering with Big Data of Ministry of Education, Hefei University of Technology, Hefei, China; School of Computer Science and Information Engineering, Hefei University of Technology, Hefei, China. Electronic address: ning.g.an@acm.org.

Huitong Ding (H)

Key Laboratory of Knowledge Engineering with Big Data of Ministry of Education, Hefei University of Technology, Hefei, China; School of Computer Science and Information Engineering, Hefei University of Technology, Hefei, China; School of Medicine, Boston University, Boston, USA. Electronic address: ding_huitong@163.com.

Jiaoyun Yang (J)

Key Laboratory of Knowledge Engineering with Big Data of Ministry of Education, Hefei University of Technology, Hefei, China; School of Computer Science and Information Engineering, Hefei University of Technology, Hefei, China. Electronic address: jiaoyun@hfut.edu.cn.

Rhoda Au (R)

School of Medicine, Boston University, Boston, USA; School of Public Health, Boston University, Boston, USA. Electronic address: rhodaau@bu.edu.

Ting F A Ang (TFA)

School of Medicine, Boston University, Boston, USA. Electronic address: alvinang@bu.edu.

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