[Identification of Curcuma herbs using XGBoost algorithm in electronic nose odor fingerprint].


Journal

Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica
ISSN: 1001-5302
Titre abrégé: Zhongguo Zhong Yao Za Zhi
Pays: China
ID NLM: 8913656

Informations de publication

Date de publication:
Dec 2019
Historique:
entrez: 3 4 2020
pubmed: 3 4 2020
medline: 6 5 2020
Statut: ppublish

Résumé

This article aims to identify four commonly applied herbs from Curcuma genus of Zingiberaceae family,namely Curcumae Radix( Yujin),Curcumae Rhizoma( Ezhu),Curcumae Longae Rhizoma( Jianghuang) and Wenyujin Rhizoma Concisum( Pianjianghuang). The odor fingerprints of those four herbal medicines were collected by electronic nose,respectively. Meanwhile,XGBoost algorithm was introduced to data analysis and discriminant model establishment,with four indexes for performance evaluation,including accuracy,precision,recall,and F-measure. The discriminant model was established by XGBoost with positive rate of returning to 166 samples in the training set and 69 samples in the test set were 99. 39% and 95. 65%,respectively. The top four of the contribution to the discriminant model were LY2/g CT,P40/1,LY2/Gh and LY2/LG,the least contributing sensor was T70/2. Compared with support vector machine,random forest and artificial neural network,XGBoost algorithms shows better identification capacity with higher recognition efficiency. The accuracy,precision,recall and F-measure of the XGBoost discriminant model forecast set were 95. 65%,95. 25%,93. 07%,93. 75%,respectively. The superiority of XGBoost in the identification of Curcuma herbs was verified. Obviously,this new method could not only be suitable for digitization and objectification of traditional Chinese medicine( TCM) odor indicators,but also achieve the identification of different TCM based on their odor fingerprint in electronic nose system. The introduction of XGBoost algorithm and more excellent algorithms provide more ideas for the application of electronic nose in data mining for TCM studies.

Identifiants

pubmed: 32237383
doi: 10.19540/j.cnki.cjcmm.20191101.101
doi:

Substances chimiques

Drugs, Chinese Herbal 0

Types de publication

Journal Article

Langues

chi

Sous-ensembles de citation

IM

Pagination

5375-5381

Auteurs

Jian-Ting Gong (JT)

Beijing Institute of Chinese Medicine Beijing 100035,China.

Jia-Yu Wang (JY)

Changchun Medical College Changchun 130031,China.

Li Li (L)

Beijing Institute of Chinese Medicine Beijing 100035,China.

Dong Xu (D)

School of Chinese Pharmacy,Beijing University of Chinese Medicine Beijing 102488,China.

Yue Cong (Y)

Beijing Institute of Chinese Medicine Beijing 100035,China.

Jia-Li Guan (JL)

Beijing Institute of Chinese Medicine Beijing 100035,China.

Hao-Zhong Wu (HZ)

School of Chinese Pharmacy,Beijing University of Chinese Medicine Beijing 102488,China.

Hui-Qin Zou (HQ)

School of Chinese Pharmacy,Beijing University of Chinese Medicine Beijing 102488,China.

Yong-Hong Yan (YH)

School of Chinese Pharmacy,Beijing University of Chinese Medicine Beijing 102488,China.

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