Molecular Identification of the "Facciuta Della Valnerina" Local Goat Population Reared in the Umbria Region, Italy.

Capra hircus SSR animal biodiversity genetic distinctiveness microsatellite markers, molecular traceability

Journal

Animals : an open access journal from MDPI
ISSN: 2076-2615
Titre abrégé: Animals (Basel)
Pays: Switzerland
ID NLM: 101635614

Informations de publication

Date de publication:
01 Apr 2020
Historique:
received: 28 02 2020
revised: 27 03 2020
accepted: 30 03 2020
entrez: 5 4 2020
pubmed: 5 4 2020
medline: 5 4 2020
Statut: epublish

Résumé

Italy holds important genetic resources of small ruminant breeds. By distinguishing goat breeds at the DNA level, certification of products from specific breeds can be valorized. The aim of this study was to establish the genetic identity of Facciuta della Valnerina, a local goat population of Italy, compared with the cosmopolitan breeds, Saanen and Camosciata delle Alpi, reared in the same geographic area. A total of 116 microsatellite alleles ranging from 4 to 13 were detected at 16 loci in the three goat populations/breeds. A total of 23 private alleles with frequencies lower than 0.3 were detected in the Facciuta della Valnerina population. The mean numbers of alleles were 6.67, 4.58, and 4.92 in Facciuta della Valnerina, Camosciata delle Alpi, and Saanen, respectively. The expected heterozygosity ranged from 0.20 to 0.86. Most loci were highly polymorphic and informative (polymorphic information content ≥0.50). Factorial correspondence analysis and principal components analysis revealed very clear separation between Facciuta della Valnerina and the two reference goat breeds. Reducing the number of markers from 16 to 12 (on the basis of polymorphic information content and the number of alleles) still allowed us to distinguish the local population, indicating that microsatellite markers are capable of discriminating local livestock breeds at a low cost.

Identifiants

pubmed: 32244771
pii: ani10040601
doi: 10.3390/ani10040601
pmc: PMC7222817
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Fondazione Cassa di Risparmio di Perugia
ID : 2016.0024.021

Déclaration de conflit d'intérêts

The authors declare no conflict of interest.

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Auteurs

Simone Ceccobelli (S)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Emiliano Lasagna (E)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Eymen Demir (E)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.
Department of Animal Science, Faculty of Agriculture, Akdeniz University, Antalya, 07058, Turkey.

Giacomo Rovelli (G)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Emidio Albertini (E)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Fabio Veronesi (F)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Francesca Maria Sarti (FM)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Daniele Rosellini (D)

Department of Agricultural, Food and Environmental Sciences, University of Perugia, Borgo XX giugno 74, 06121, Italy.

Classifications MeSH