From Polygenic Scores to Precision Medicine in Alzheimer's Disease: A Systematic Review.
Alzheimer’s disease
alleles
amyloid-beta peptides
cognitive dysfunction
genome-wide association study
multifactorial inheritance
neuroimaging
phenotype
precision medicine
single nucleotide polymorphism
Journal
Journal of Alzheimer's disease : JAD
ISSN: 1875-8908
Titre abrégé: J Alzheimers Dis
Pays: Netherlands
ID NLM: 9814863
Informations de publication
Date de publication:
2020
2020
Historique:
pubmed:
7
4
2020
medline:
8
5
2021
entrez:
7
4
2020
Statut:
ppublish
Résumé
Late-onset Alzheimer's disease (AD) is highly heritable. The effect of many common genetic variants, single nucleotide polymorphisms (SNPs), confer risk. Variants are clustered in areas of biology, notably immunity and inflammation, cholesterol metabolism, endocytosis, and ubiquitination. Polygenic scores (PRS), which weight the sum of an individual's risk alleles, have been used to draw inferences about the pathological processes underpinning AD. This paper aims to systematically review how AD PRS are being used to study a range of outcomes and phenotypes related to neurodegeneration. We searched the literature from July 2008-July 2018 following PRISMA guidelines. 57 studies met criteria. The AD PRS can distinguish AD cases from controls. The ability of AD PRS to predict conversion from mild cognitive impairment (MCI) to AD was less clear. There was strong evidence of association between AD PRS and cognitive impairment. AD PRS were correlated with a number of biological phenotypes associated with AD pathology, such as neuroimaging changes and amyloid and tau measures. Pathway-specific polygenic scores were also associated with AD-related biologically relevant phenotypes. PRS can predict AD effectively and are associated with cognitive impairment. There is also evidence of association between AD PRS and other phenotypes relevant to neurodegeneration. The associations between pathway specific polygenic scores and phenotypic changes may allow us to define the biology of the disease in individuals and indicate who may benefit from specific treatments. Longitudinal cohort studies are required to test the ability of PGS to delineate pathway-specific disease activity.
Sections du résumé
BACKGROUND
Late-onset Alzheimer's disease (AD) is highly heritable. The effect of many common genetic variants, single nucleotide polymorphisms (SNPs), confer risk. Variants are clustered in areas of biology, notably immunity and inflammation, cholesterol metabolism, endocytosis, and ubiquitination. Polygenic scores (PRS), which weight the sum of an individual's risk alleles, have been used to draw inferences about the pathological processes underpinning AD.
OBJECTIVE
This paper aims to systematically review how AD PRS are being used to study a range of outcomes and phenotypes related to neurodegeneration.
METHODS
We searched the literature from July 2008-July 2018 following PRISMA guidelines.
RESULTS
57 studies met criteria. The AD PRS can distinguish AD cases from controls. The ability of AD PRS to predict conversion from mild cognitive impairment (MCI) to AD was less clear. There was strong evidence of association between AD PRS and cognitive impairment. AD PRS were correlated with a number of biological phenotypes associated with AD pathology, such as neuroimaging changes and amyloid and tau measures. Pathway-specific polygenic scores were also associated with AD-related biologically relevant phenotypes.
CONCLUSION
PRS can predict AD effectively and are associated with cognitive impairment. There is also evidence of association between AD PRS and other phenotypes relevant to neurodegeneration. The associations between pathway specific polygenic scores and phenotypic changes may allow us to define the biology of the disease in individuals and indicate who may benefit from specific treatments. Longitudinal cohort studies are required to test the ability of PGS to delineate pathway-specific disease activity.
Identifiants
pubmed: 32250305
pii: JAD191233
doi: 10.3233/JAD-191233
pmc: PMC7242840
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Systematic Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
1271-1283Subventions
Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/L010305/1
Pays : United Kingdom
Organisme : Medical Research Council
ID : G0801418
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/T04604X/1
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/L010305
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/P005748/1
Pays : United Kingdom
Organisme : Medical Research Council
ID : MR/L023784/2
Pays : United Kingdom
Références
J Alzheimers Dis. 2017;57(2):423-436
pubmed: 28269768
Neurobiol Aging. 2016 Apr;40:68-77
pubmed: 26973105
Biol Psychiatry. 2017 Jan 15;81(2):154-161
pubmed: 27157680
Nat Genet. 2019 Mar;51(3):414-430
pubmed: 30820047
J Alzheimers Dis. 2017;56(2):491-507
pubmed: 28035927
Neurobiol Aging. 2015 Jan;36(1):60-7
pubmed: 25189118
Neurobiol Aging. 2016 May;41:150-158
pubmed: 27103528
Mol Psychiatry. 2016 Nov;21(11):1624-1632
pubmed: 26809841
Nat Genet. 2013 Dec;45(12):1452-8
pubmed: 24162737
Alzheimers Res Ther. 2017 Mar 4;9(1):16
pubmed: 28259165
BMC Neurol. 2015 Mar 28;15:47
pubmed: 25880661
Front Aging Neurosci. 2014 Aug 04;6:183
pubmed: 25140149
Am J Med Genet B Neuropsychiatr Genet. 2017 Apr;174(3):269-282
pubmed: 27781389
Neurobiol Aging. 2018 Apr;64:116-122
pubmed: 29358118
Ann Intern Med. 2009 Aug 18;151(4):264-9, W64
pubmed: 19622511
J Neural Transm (Vienna). 2013 May;120(5):807-12
pubmed: 23180304
J Alzheimers Dis. 2016 Dec 6;55(3):995-1003
pubmed: 27802227
Transl Psychiatry. 2016 Apr 05;6:e775
pubmed: 27045845
J Aging Res. 2015;2015:267062
pubmed: 26366299
Neuropsychol Rev. 2015 Mar;25(1):47-62
pubmed: 25666727
Ann Neurol. 2017 Aug;82(2):311-314
pubmed: 28727176
Mol Psychiatry. 2014 Dec;19(12):1326-35
pubmed: 24535457
Brain Behav. 2014 Sep;4(5):687-97
pubmed: 25328845
Alzheimers Dement. 2015 Dec;11(12):1452-1460
pubmed: 26086184
PLoS One. 2017 Sep 28;12(9):e0185083
pubmed: 28957414
J Alzheimers Dis. 2013;33(3):831-40
pubmed: 23042215
Biol Psychiatry Cogn Neurosci Neuroimaging. 2016 Jan 1;1(1):14-23
pubmed: 26858991
Biol Psychiatry. 2013 Mar 1;73(5):429-34
pubmed: 22592056
Transl Psychiatry. 2018 Aug 24;8(1):166
pubmed: 30143603
J Alzheimers Dis. 2015;43(2):565-73
pubmed: 25096612
PLoS Genet. 2013 Mar;9(3):e1003348
pubmed: 23555274
J Alzheimers Dis. 2016 Jun 18;53(3):921-32
pubmed: 27340842
J Alzheimers Dis. 2014;39(3):565-74
pubmed: 24246418
PLoS One. 2010 Nov 15;5(11):e13950
pubmed: 21085570
J Gerontol A Biol Sci Med Sci. 1997 Mar;52(2):M117-25
pubmed: 9060980
Mol Psychiatry. 2019 Mar;24(3):421-430
pubmed: 29487403
J Alzheimers Dis. 2017;57(1):275-283
pubmed: 28222519
J Alzheimers Dis. 2017;55(4):1417-1427
pubmed: 27834776
Alzheimers Dement. 2016 Aug;12(8):872-81
pubmed: 26921674
Neurology. 2016 Aug 2;87(5):481-8
pubmed: 27385740
Hum Hered. 2010;70(2):141-9
pubmed: 20616560
J Alzheimers Dis. 2018;62(2):887-900
pubmed: 29480189
J Cogn Neurosci. 2017 Feb;29(2):245-253
pubmed: 27647283
Schizophr Res. 2018 Jul;197:2-8
pubmed: 29129507
Am J Psychiatry. 2018 Jun 1;175(6):555-563
pubmed: 29495896
Mol Psychiatry. 2016 Jun;21(6):758-67
pubmed: 27046643
Alzheimers Dement. 2018 Feb;14(2):205-214
pubmed: 28943286
eNeuro. 2016 Jul 15;3(3):
pubmed: 27482534
Oncotarget. 2015 Nov 10;6(35):36955-64
pubmed: 26543236
Aging (Albany NY). 2016 Mar;8(3):547-60
pubmed: 27015805
Neurology. 2017 Mar 21;88(12):1180-1186
pubmed: 28213371
J Alzheimers Dis. 2016 Nov 19;55(2):473-484
pubmed: 27662287
Neuroimage. 2018 May 15;172:118-129
pubmed: 29357308
J Child Psychol Psychiatry. 2014 Oct;55(10):1068-87
pubmed: 25132410
Nature. 2009 Aug 6;460(7256):748-52
pubmed: 19571811
J Alzheimers Dis. 2018;62(2):745-756
pubmed: 29480181
PLoS One. 2017 Nov 30;12(11):e0188501
pubmed: 29190651
Alzheimers Dement. 2018 Jul;14(7):848-857
pubmed: 29494809
Arch Neurol. 2010 Jun;67(6):677-85
pubmed: 20558387
Cereb Cortex. 2012 Nov;22(11):2653-61
pubmed: 22169231
Neuropathol Appl Neurobiol. 2018 Aug;44(5):506-521
pubmed: 29181857
Transl Psychiatry. 2017 Apr 18;7(4):e1094
pubmed: 28418403
Acta Neuropathol. 2018 Jan;135(1):85-93
pubmed: 29177679
PLoS One. 2015 Mar 04;10(3):e0118338
pubmed: 25738563
Brain. 2015 Dec;138(Pt 12):3673-84
pubmed: 26490334
Alzheimers Dement. 2015 Nov;11(11):1277-85
pubmed: 25916564
J Alzheimers Dis. 2017;56(1):25-36
pubmed: 27911318
Mol Neurodegener. 2018 Jul 24;13(1):38
pubmed: 30041668
Mol Psychiatry. 2017 Jan;22(1):153-160
pubmed: 26976043
Brain. 2017 Mar 1;140(3):813-825
pubmed: 28077398
Alzheimer Dis Assoc Disord. 2016 Jul-Sep;30(3):195-202
pubmed: 26756387
J Neurotrauma. 2017 Feb 15;34(4):781-789
pubmed: 27439997
Neurology. 2017 Apr 25;88(17):1650-1658
pubmed: 28341646
PLoS One. 2015 Jun 23;10(6):e0130419
pubmed: 26102276