The Microbiomes of Seven Lichen Genera Reveal Host Specificity, a Reduced Core Community and Potential as Source of Antimicrobials.
Paramo ecosystem
antimicrobials
core
lichen
microbiome
Journal
Frontiers in microbiology
ISSN: 1664-302X
Titre abrégé: Front Microbiol
Pays: Switzerland
ID NLM: 101548977
Informations de publication
Date de publication:
2020
2020
Historique:
received:
17
11
2019
accepted:
26
02
2020
entrez:
9
4
2020
pubmed:
9
4
2020
medline:
9
4
2020
Statut:
epublish
Résumé
The High Andean Paramo ecosystem is a unique neotropical mountain biome considered a diversity and evolutionary hotspot. Lichens, which are complex symbiotic structures that contain diverse commensal microbial communities, are prevalent in Paramos. There they play vital roles in soil formation and mineral fixation. In this study we analyzed the microbiomes of seven lichen genera in Colombian Paramos using 16S rRNA gene amplicon sequencing and provide the first description of the bacterial communities associated with
Identifiants
pubmed: 32265864
doi: 10.3389/fmicb.2020.00398
pmc: PMC7105886
doi:
Types de publication
Journal Article
Langues
eng
Pagination
398Informations de copyright
Copyright © 2020 Sierra, Danko, Sandoval, Pishchany, Moncada, Kolter, Mason and Zambrano.
Références
Nat Commun. 2017 Aug 9;8(1):215
pubmed: 28790312
FEMS Microbiol Ecol. 2016 Jun;92(6):fiw090
pubmed: 27127196
Nat Commun. 2019 Jan 31;10(1):516
pubmed: 30705269
Nat Commun. 2016 Jun 16;7:11870
pubmed: 27306690
ISME J. 2013 Jan;7(1):37-49
pubmed: 22791236
Org Lett. 2005 Nov 10;7(23):5233-6
pubmed: 16268546
ISME J. 2014 Jun;8(6):1198-209
pubmed: 24401862
ISME J. 2009 Sep;3(9):1105-15
pubmed: 19554038
ISME J. 2015 Feb;9(2):412-24
pubmed: 25072413
Naturwissenschaften. 2008 Aug;95(8):705-12
pubmed: 18350264
Trends Ecol Evol. 2016 Jul;31(7):539-549
pubmed: 27039196
Environ Microbiol. 2014 Dec;16(12):3743-52
pubmed: 25331462
Biochim Biophys Acta. 2013 Jun;1830(6):3670-95
pubmed: 23428572
Front Microbiol. 2015 May 01;6:398
pubmed: 25983730
Environ Microbiol Rep. 2011 Aug;3(4):434-42
pubmed: 23761305
Nucleic Acids Res. 2002 Jul 15;30(14):3059-66
pubmed: 12136088
Science. 2008 Jun 20;320(5883):1647-51
pubmed: 18497261
Front Microbiol. 2016 Feb 18;7:180
pubmed: 26925047
Environ Microbiol. 2012 Jan;14(1):147-61
pubmed: 21906220
Appl Environ Microbiol. 2011 Jun;77(12):4249-52
pubmed: 21531831
Appl Environ Microbiol. 2009 Dec;75(23):7537-41
pubmed: 19801464
PLoS One. 2013 Apr 22;8(4):e61217
pubmed: 23630581
Iran J Microbiol. 2016 Oct;8(5):307-311
pubmed: 28149489
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
FEMS Microbiol Ecol. 2005 Nov 1;54(3):401-15
pubmed: 16332338
Microb Ecol. 2017 Oct;74(3):570-584
pubmed: 28361265
PLoS Biol. 2010 Nov 16;8(11):e1000546
pubmed: 21103409
PeerJ. 2018 Jul 17;6:e5208
pubmed: 30038864
Q Rev Biol. 2012 Dec;87(4):325-41
pubmed: 23397797
Front Microbiol. 2017 Nov 15;8:2224
pubmed: 29187837
Microbiome. 2014 Jul 11;2:24
pubmed: 25061513
ISME J. 2012 Mar;6(3):610-8
pubmed: 22134646
Ann Bot. 2012 Aug;110(3):555-63
pubmed: 22648879
MD Comput. 1997 Jul-Aug;14(4):306-17
pubmed: 9230594
J Biosci. 2006 Dec;31(5):639-43
pubmed: 17301502
Sci Rep. 2015 Oct 30;5:15839
pubmed: 26514347
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
FEMS Microbiol Ecol. 2008 Oct;66(1):63-71
pubmed: 18631179
Mol Ecol. 2017 May;26(10):2826-2838
pubmed: 28222236
Science. 2005 May 13;308(5724):1017-20
pubmed: 15890881
Environ Microbiol. 2012 Jan;14(1):4-12
pubmed: 22004523
Front Microbiol. 2015 Jun 22;6:620
pubmed: 26157431
Curr Biol. 2018 Aug 6;28(15):2487-2492.e3
pubmed: 30057302
Mol Phylogenet Evol. 2010 Jan;54(1):36-46
pubmed: 19853051
Science. 2008 Sep 19;321(5896):1644-5
pubmed: 18801989
Microbiol Immunol. 2002;46(8):535-48
pubmed: 12363017
Trends Plant Sci. 2012 Aug;17(8):478-86
pubmed: 22564542
mBio. 2014 Jul 15;5(4):e01371-14
pubmed: 25028427
Microbiol Mol Biol Rev. 2010 Sep;74(3):417-33
pubmed: 20805405
Front Microbiol. 2020 Mar 24;11:398
pubmed: 32265864
Science. 2016 Jul 29;353(6298):488-92
pubmed: 27445309
Nat Microbiol. 2019 May;4(5):864-875
pubmed: 30858574
ISME J. 2015 Oct;9(10):2261-74
pubmed: 25885563
FEMS Microbiol Ecol. 2006 Sep;57(3):484-95
pubmed: 16907761
Proc Natl Acad Sci U S A. 2014 Jul 29;111(30):11091-6
pubmed: 24982168
J Vis Exp. 2017 Jan 14;(119):
pubmed: 28117830
Appl Environ Microbiol. 2011 Feb;77(4):1309-14
pubmed: 21169444
Mol Ecol. 2014 Mar;23(6):1268-1283
pubmed: 24304129
Brief Bioinform. 2019 Jul 19;20(4):1160-1166
pubmed: 28968734
Can J Microbiol. 2016 Aug;62(8):692-703
pubmed: 27314511
Nature. 2018 Jun;558(7710):440-444
pubmed: 29899444
FEMS Microbiol Ecol. 2016 Nov;92(11):
pubmed: 27543320
Front Microbiol. 2015 Feb 10;6:53
pubmed: 25713563
Mol Plant. 2013 Mar;6(2):242-5
pubmed: 23475999
Cell Host Microbe. 2015 May 13;17(5):603-16
pubmed: 25974302
Science. 2002 Jul 19;297(5580):357
pubmed: 12130774
Microbiome. 2017 Jul 19;5(1):82
pubmed: 28724401
Indian J Microbiol. 2014 Jun;54(2):178-84
pubmed: 25320419
Nature. 2000 Feb 24;403(6772):853-8
pubmed: 10706275
PLoS One. 2013 Jul 02;8(7):e67019
pubmed: 23843979
Microbiome. 2018 Jun 28;6(1):117
pubmed: 29954448
Microbiol Mol Biol Rev. 2015 Nov 25;80(1):1-43
pubmed: 26609051