Evaluation of the quality of clinical data collection for a pan-Canadian cohort of children affected by inherited metabolic diseases: lessons learned from the Canadian Inherited Metabolic Diseases Research Network.

Data quality Database Inherited metabolic diseases Observational research Registry science Sustainability

Journal

Orphanet journal of rare diseases
ISSN: 1750-1172
Titre abrégé: Orphanet J Rare Dis
Pays: England
ID NLM: 101266602

Informations de publication

Date de publication:
10 04 2020
Historique:
received: 09 12 2019
accepted: 17 03 2020
entrez: 12 4 2020
pubmed: 12 4 2020
medline: 22 6 2021
Statut: epublish

Résumé

The Canadian Inherited Metabolic Diseases Research Network (CIMDRN) is a pan-Canadian practice-based research network of 14 Hereditary Metabolic Disease Treatment Centres and over 50 investigators. CIMDRN aims to develop evidence to improve health outcomes for children with inherited metabolic diseases (IMD). We describe the development of our clinical data collection platform, discuss our data quality management plan, and present the findings to date from our data quality assessment, highlighting key lessons that can serve as a resource for future clinical research initiatives relating to rare diseases. At participating centres, children born from 2006 to 2015 who were diagnosed with one of 31 targeted IMD were eligible to participate in CIMDRN's clinical research stream. For all participants, we collected a minimum data set that includes information about demographics and diagnosis. For children with five prioritized IMD, we collected longitudinal data including interventions, clinical outcomes, and indicators of disease management. The data quality management plan included: design of user-friendly and intuitive clinical data collection forms; validation measures at point of data entry, designed to minimize data entry errors; regular communications with each CIMDRN site; and routine review of aggregate data. As of June 2019, CIMDRN has enrolled 798 participants of whom 764 (96%) have complete minimum data set information. Results from our data quality assessment revealed that potential data quality issues were related to interpretation of definitions of some variables, participants who transferred care across institutions, and the organization of information within the patient charts (e.g., neuropsychological test results). Little information was missing regarding disease ascertainment and diagnosis (e.g., ascertainment method - 0% missing). Using several data quality management strategies, we have established a comprehensive clinical database that provides information about care and outcomes for Canadian children affected by IMD. We describe quality issues and lessons for consideration in future clinical research initiatives for rare diseases, including accurately accommodating different clinic workflows and balancing comprehensiveness of data collection with available resources. Integrating data collection within clinical care, leveraging electronic medical records, and implementing core outcome sets will be essential for achieving sustainability.

Sections du résumé

BACKGROUND
The Canadian Inherited Metabolic Diseases Research Network (CIMDRN) is a pan-Canadian practice-based research network of 14 Hereditary Metabolic Disease Treatment Centres and over 50 investigators. CIMDRN aims to develop evidence to improve health outcomes for children with inherited metabolic diseases (IMD). We describe the development of our clinical data collection platform, discuss our data quality management plan, and present the findings to date from our data quality assessment, highlighting key lessons that can serve as a resource for future clinical research initiatives relating to rare diseases.
METHODS
At participating centres, children born from 2006 to 2015 who were diagnosed with one of 31 targeted IMD were eligible to participate in CIMDRN's clinical research stream. For all participants, we collected a minimum data set that includes information about demographics and diagnosis. For children with five prioritized IMD, we collected longitudinal data including interventions, clinical outcomes, and indicators of disease management. The data quality management plan included: design of user-friendly and intuitive clinical data collection forms; validation measures at point of data entry, designed to minimize data entry errors; regular communications with each CIMDRN site; and routine review of aggregate data.
RESULTS
As of June 2019, CIMDRN has enrolled 798 participants of whom 764 (96%) have complete minimum data set information. Results from our data quality assessment revealed that potential data quality issues were related to interpretation of definitions of some variables, participants who transferred care across institutions, and the organization of information within the patient charts (e.g., neuropsychological test results). Little information was missing regarding disease ascertainment and diagnosis (e.g., ascertainment method - 0% missing).
DISCUSSION
Using several data quality management strategies, we have established a comprehensive clinical database that provides information about care and outcomes for Canadian children affected by IMD. We describe quality issues and lessons for consideration in future clinical research initiatives for rare diseases, including accurately accommodating different clinic workflows and balancing comprehensiveness of data collection with available resources. Integrating data collection within clinical care, leveraging electronic medical records, and implementing core outcome sets will be essential for achieving sustainability.

Identifiants

pubmed: 32276663
doi: 10.1186/s13023-020-01358-z
pii: 10.1186/s13023-020-01358-z
pmc: PMC7149838
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

89

Subventions

Organisme : CIHR
ID : TR3-119195
Pays : Canada

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Auteurs

Kylie Tingley (K)

University of Ottawa, Ottawa, Ontario, Canada.

Monica Lamoureux (M)

Newborn Screening Ontario, Children's Hospital of Eastern Ontario, 401 Smyth Road, Ottawa, Ontario, K1H 8L1, Canada.

Michael Pugliese (M)

University of Ottawa, Ottawa, Ontario, Canada.

Michael T Geraghty (MT)

University of Ottawa, Ottawa, Ontario, Canada.
Newborn Screening Ontario, Children's Hospital of Eastern Ontario, 401 Smyth Road, Ottawa, Ontario, K1H 8L1, Canada.

Jonathan B Kronick (JB)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Beth K Potter (BK)

University of Ottawa, Ottawa, Ontario, Canada.

Doug Coyle (D)

University of Ottawa, Ottawa, Ontario, Canada.

Kumanan Wilson (K)

University of Ottawa, Ottawa, Ontario, Canada.
Bruyère Research Institute, Ottawa, ON, Canada.
Department of Medicine, Ottawa Hospital Research Institute, Ottawa, ON, Canada.

Michael Kowalski (M)

Newborn Screening Ontario, Children's Hospital of Eastern Ontario, 401 Smyth Road, Ottawa, Ontario, K1H 8L1, Canada.

Valerie Austin (V)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Catherine Brunel-Guitton (C)

Le centre hospitalier universitaire Ste-Justine, Montreal, Quebec, Canada.

Daniela Buhas (D)

Montreal Children's Hospital, McGill University, Montreal, Quebec, Canada.

Alicia K J Chan (AKJ)

Stollery Children's Hospital, University of Alberta, Edmonton, Alberta, Canada.

Sarah Dyack (S)

IWK Health Centre, Dalhousie University, Halifax, Nova Scotia, Canada.

Annette Feigenbaum (A)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Alette Giezen (A)

BC Children's Hospital, University of British Columbia, Vancouver, British Columbia, Canada.

Sharan Goobie (S)

IWK Health Centre, Dalhousie University, Halifax, Nova Scotia, Canada.

Cheryl R Greenberg (CR)

Health Sciences Centre Winnipeg, University of Manitoba, Winnipeg, Manitoba, Canada.

Shailly Jain Ghai (SJ)

Stollery Children's Hospital, University of Alberta, Edmonton, Alberta, Canada.

Michal Inbar-Feigenberg (M)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Natalya Karp (N)

London Health Sciences Centre, Western University, London, Ontario, Canada.

Mariya Kozenko (M)

Hamilton Health Sciences Centre, McMaster University, Hamilton, Ontario, Canada.

Erica Langley (E)

Newborn Screening Ontario, Children's Hospital of Eastern Ontario, 401 Smyth Road, Ottawa, Ontario, K1H 8L1, Canada.

Matthew Lines (M)

Newborn Screening Ontario, Children's Hospital of Eastern Ontario, 401 Smyth Road, Ottawa, Ontario, K1H 8L1, Canada.

Julian Little (J)

University of Ottawa, Ottawa, Ontario, Canada.

Jennifer MacKenzie (J)

Hamilton Health Sciences Centre, McMaster University, Hamilton, Ontario, Canada.

Bruno Maranda (B)

Le centre hospitalier universitaire Sherbrooke, Sherbrooke, Quebec, Canada.

Saadet Mercimek-Andrews (S)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Connie Mohan (C)

Alberta Children's Hospital, University of Calgary, Calgary, Alberta, Canada.

Aizeddin Mhanni (A)

Health Sciences Centre Winnipeg, University of Manitoba, Winnipeg, Manitoba, Canada.

Grant Mitchell (G)

Le centre hospitalier universitaire Ste-Justine, Montreal, Quebec, Canada.

John J Mitchell (JJ)

Montreal Children's Hospital, McGill University, Montreal, Quebec, Canada.

Laura Nagy (L)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Melanie Napier (M)

London Health Sciences Centre, Western University, London, Ontario, Canada.

Amy Pender (A)

Hamilton Health Sciences Centre, McMaster University, Hamilton, Ontario, Canada.

Murray Potter (M)

Hamilton Health Sciences Centre, McMaster University, Hamilton, Ontario, Canada.

Chitra Prasad (C)

London Health Sciences Centre, Western University, London, Ontario, Canada.

Suzanne Ratko (S)

London Health Sciences Centre, Western University, London, Ontario, Canada.

Ramona Salvarinova (R)

BC Children's Hospital, University of British Columbia, Vancouver, British Columbia, Canada.

Andreas Schulze (A)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Komudi Siriwardena (K)

Stollery Children's Hospital, University of Alberta, Edmonton, Alberta, Canada.

Neal Sondheimer (N)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Rebecca Sparkes (R)

Alberta Children's Hospital, University of Calgary, Calgary, Alberta, Canada.

Sylvia Stockler-Ipsiroglu (S)

BC Children's Hospital, University of British Columbia, Vancouver, British Columbia, Canada.

Yannis Trakadis (Y)

Montreal Children's Hospital, McGill University, Montreal, Quebec, Canada.

Lesley Turner (L)

Janeway Children's Hospital, Memorial University, St John's, NL, Canada.

Clara Van Karnebeek (C)

BC Children's Hospital, University of British Columbia, Vancouver, British Columbia, Canada.

Hilary Vallance (H)

BC Children's Hospital, University of British Columbia, Vancouver, British Columbia, Canada.

Anthony Vandersteen (A)

IWK Health Centre, Dalhousie University, Halifax, Nova Scotia, Canada.

Jagdeep Walia (J)

Kingston General Hospital, Queen's University, Kingston, Ontario, Canada.

Ashley Wilson (A)

The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada.

Brenda J Wilson (BJ)

Janeway Children's Hospital, Memorial University, St John's, NL, Canada.

Andrea C Yu (AC)

London Health Sciences Centre, Western University, London, Ontario, Canada.

Nataliya Yuskiv (N)

BC Children's Hospital, University of British Columbia, Vancouver, British Columbia, Canada.

Pranesh Chakraborty (P)

University of Ottawa, Ottawa, Ontario, Canada. pchakraborty@cheo.on.ca.
Newborn Screening Ontario, Children's Hospital of Eastern Ontario, 401 Smyth Road, Ottawa, Ontario, K1H 8L1, Canada. pchakraborty@cheo.on.ca.

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