A molecular odorant transduction model and the complexity of spatio-temporal encoding in the Drosophila antenna.


Journal

PLoS computational biology
ISSN: 1553-7358
Titre abrégé: PLoS Comput Biol
Pays: United States
ID NLM: 101238922

Informations de publication

Date de publication:
04 2020
Historique:
received: 06 06 2019
accepted: 27 02 2020
revised: 24 04 2020
pubmed: 15 4 2020
medline: 15 7 2020
entrez: 15 4 2020
Statut: epublish

Résumé

Over the past two decades, substantial amount of work has been conducted to characterize different odorant receptors, neuroanatomy and odorant response properties of the early olfactory system of Drosophila melanogaster. Yet many odorant receptors remain only partially characterized, and the odorant transduction process and the axon hillock spiking mechanism of the olfactory sensory neurons (OSNs) have yet to be fully determined. Identity and concentration, two key characteristics of the space of odorants, are encoded by the odorant transduction process. Detailed molecular models of the odorant transduction process are, however, scarce for fruit flies. To address these challenges we advance a comprehensive model of fruit fly OSNs as a cascade consisting of an odorant transduction process (OTP) and a biophysical spike generator (BSG). We model odorant identity and concentration using an odorant-receptor binding rate tensor, modulated by the odorant concentration profile, and an odorant-receptor dissociation rate tensor, and quantitatively describe the mechanics of the molecular ligand binding/dissociation of the OTP. We model the BSG as a Connor-Stevens point neuron. The resulting spatio-temporal encoding model of the Drosophila antenna provides a theoretical foundation for understanding the neural code of both odorant identity and odorant concentration and advances the state-of-the-art in a number of ways. First, it quantifies on the molecular level the spatio-temporal level of complexity of the transformation taking place in the antennae. The concentration-dependent spatio-temporal code at the output of the antenna circuits determines the level of complexity of olfactory processing in the downstream neuropils, such as odorant recognition and olfactory associative learning. Second, the model is biologically validated using multiple electrophysiological recordings. Third, the model demonstrates that the currently available data for odorant-receptor responses only enable the estimation of the affinity of the odorant-receptor pairs. The odorant-dissociation rate is only available for a few odorant-receptor pairs. Finally, our model calls for new experiments for massively identifying the odorant-receptor dissociation rates of relevance to flies.

Identifiants

pubmed: 32287275
doi: 10.1371/journal.pcbi.1007751
pii: PCOMPBIOL-D-19-00920
pmc: PMC7182276
doi:

Substances chimiques

Drosophila Proteins 0
Receptors, Odorant 0

Types de publication

Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1007751

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Références

Proc Biol Sci. 2009 Oct 7;276(1672):3413-20
pubmed: 19586944
Elife. 2017 Jun 28;6:
pubmed: 28653907
J Comp Physiol A Neuroethol Sens Neural Behav Physiol. 2013 Nov;199(11):879-96
pubmed: 23563709
Science. 1999 Oct 22;286(5440):723-8
pubmed: 10531051
J Neurosci. 1999 Jun 1;19(11):4520-32
pubmed: 10341252
Curr Biol. 2005 Sep 6;15(17):1535-47
pubmed: 16139208
Nat Neurosci. 2014 Apr;17(4):559-68
pubmed: 24561998
Cell. 2006 Apr 7;125(1):143-60
pubmed: 16615896
Nature. 2008 Apr 24;452(7190):1007-11
pubmed: 18408711
Nat Rev Neurosci. 2010 Mar;11(3):188-200
pubmed: 20145624
Neuron. 2001 May;30(2):537-52
pubmed: 11395013
Annu Rev Neurosci. 2013 Jul 8;36:217-41
pubmed: 23841839
Chem Senses. 2010 Sep;35(7):551-63
pubmed: 20530377
Proc Natl Acad Sci U S A. 2016 Feb 16;113(7):E902-11
pubmed: 26831094
J Comput Neurosci. 1996 Mar;3(1):51-72
pubmed: 8717489
PLoS Comput Biol. 2009 Mar;5(3):e1000321
pubmed: 19300479
Elife. 2015 May 14;4:
pubmed: 25974217
Neuron. 2016 Jul 6;91(1):155-67
pubmed: 27321924
Dev Cell. 2012 Feb 14;22(2):363-76
pubmed: 22340498
J Physiol. 1971 Feb;213(1):31-53
pubmed: 5575343
Annu Rev Physiol. 2009;71:307-32
pubmed: 19575682
Proc Natl Acad Sci U S A. 2005 Jul 26;102(30):10415-20
pubmed: 16027364
J Neurosci. 2013 Apr 10;33(15):6285-97
pubmed: 23575828
Curr Biol. 2009 Aug 25;19(16):R700-13
pubmed: 19706282
Nat Neurosci. 2014 Sep;17(9):1225-32
pubmed: 25086608
Nat Neurosci. 2011 Feb;14(2):208-16
pubmed: 21217763
Cell. 2004 Jun 25;117(7):965-79
pubmed: 15210116
Insect Biochem Mol Biol. 2008 Aug;38(8):770-80
pubmed: 18625400
Proc Natl Acad Sci U S A. 1999 Oct 26;96(22):12506-11
pubmed: 10535952
Chem Senses. 2002 Nov;27(9):789-801
pubmed: 12438204
Proc Natl Acad Sci U S A. 2008 Oct 14;105(41):15985-90
pubmed: 18824685
Curr Biol. 2011 Jan 11;21(1):1-11
pubmed: 21129968
Neuron. 2004 Sep 2;43(5):703-14
pubmed: 15339651
Neuron. 2015 Dec 2;88(5):985-998
pubmed: 26637800
Sci Rep. 2016 Feb 25;6:21841
pubmed: 26912260
Cell. 1999 Mar 5;96(5):713-23
pubmed: 10089886
PLoS Biol. 2006 Feb;4(2):e20
pubmed: 16402857
Annu Rev Entomol. 2013;58:373-91
pubmed: 23020622
J Neurosci. 2008 Mar 5;28(10):2659-66
pubmed: 18322109
PLoS One. 2016 Jan 11;11(1):e0146581
pubmed: 26751378
J Comput Neurosci. 2011 Feb;30(1):143-61
pubmed: 20730480
Cell Mol Life Sci. 2018 Feb;75(3):485-508
pubmed: 28828501
Sci Rep. 2013;3:1251
pubmed: 23409242
J R Soc Interface. 2012 Dec 12;10(79):20120835
pubmed: 23235262
Nature. 2008 Apr 24;452(7190):1002-6
pubmed: 18408712
Cell. 2009 Oct 2;139(1):45-59
pubmed: 19804753
Biophys J. 2012 Jun 20;102(12):2677-86
pubmed: 22735517
J Neurobiol. 2006 Dec;66(14):1544-63
pubmed: 17103386

Auteurs

Aurel A Lazar (AA)

Department of Electrical Engineering, Columbia University, New York, New York, United States of America.

Chung-Heng Yeh (CH)

Department of Electrical Engineering, Columbia University, New York, New York, United States of America.

Articles similaires

Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice
Animals Tail Swine Behavior, Animal Animal Husbandry

Classifications MeSH