A multiproducer microbiome generates chemical diversity in the marine sponge


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
28 04 2020
Historique:
pubmed: 16 4 2020
medline: 11 8 2020
entrez: 16 4 2020
Statut: ppublish

Résumé

Bacterial specialized metabolites are increasingly recognized as important factors in animal-microbiome interactions: for example, by providing the host with chemical defenses. Even in chemically rich animals, such compounds have been found to originate from individual members of more diverse microbiomes. Here, we identified a remarkable case of a moderately complex microbiome in the sponge host

Identifiants

pubmed: 32291345
pii: 1919245117
doi: 10.1073/pnas.1919245117
pmc: PMC7196800
doi:

Substances chimiques

Cytotoxins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

9508-9518

Informations de copyright

Copyright © 2020 the Author(s). Published by PNAS.

Déclaration de conflit d'intérêts

The authors declare no competing interest.

Références

Sci Rep. 2015 Feb 10;5:8365
pubmed: 25666585
Chembiochem. 2017 Mar 2;18(5):444-450
pubmed: 27966282
Nat Chem. 2019 Oct;11(10):931-939
pubmed: 31501509
Angew Chem Int Ed Engl. 2017 Jan 16;56(3):762-766
pubmed: 27958669
Curr Biol. 2013 Aug 5;23(15):1478-84
pubmed: 23850282
Cancer Res. 2004 Aug 1;64(15):5063-7
pubmed: 15289305
J Chem Ecol. 2005 May;31(5):1161-74
pubmed: 16124239
mSphere. 2015 Dec 30;1(1):
pubmed: 27303675
Bioinformatics. 2009 Jul 15;25(14):1754-60
pubmed: 19451168
Cancer Res. 2002 Jun 15;62(12):3356-60
pubmed: 12067973
Nat Prod Rep. 2015 Jul;32(7):904-36
pubmed: 25891201
Nat Prod Rep. 2008 Oct;25(5):845-53
pubmed: 18820753
J Biol Chem. 2017 May 26;292(21):8546-8552
pubmed: 28389564
Nat Biotechnol. 2008 Feb;26(2):225-33
pubmed: 18223641
Science. 2019 Jun 14;364(6445):
pubmed: 31196985
Angew Chem Int Ed Engl. 2018 Sep 3;57(36):11644-11648
pubmed: 29898240
J Nat Prod. 2013 Apr 26;76(4):685-93
pubmed: 23517093
J Am Chem Soc. 2012 Aug 15;134(32):13192-5
pubmed: 22765305
Oecologia. 1996 Aug;107(3):293-300
pubmed: 28307257
Appl Environ Microbiol. 2016 May 31;82(12):3450-60
pubmed: 27037119
Nature. 2014 Feb 6;506(7486):58-62
pubmed: 24476823
J Org Chem. 2000 Jan 28;65(2):445-9
pubmed: 10813954
Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):E347-E356
pubmed: 28049838
Environ Microbiol. 2016 Sep;18(8):2481-94
pubmed: 26637128
Bioinformatics. 2015 May 15;31(10):1674-6
pubmed: 25609793
Nat Chem Biol. 2018 Feb;14(2):179-185
pubmed: 29291350
PLoS One. 2012;7(4):e35105
pubmed: 22558119
Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):E11131-E11140
pubmed: 29229819
Nat Biotechnol. 2018 Nov;36(10):996-1004
pubmed: 30148503
Proc Natl Acad Sci U S A. 2004 Nov 16;101(46):16222-7
pubmed: 15520376
Nat Chem Biol. 2015 Sep;11(9):705-12
pubmed: 26236936
mBio. 2016 Apr 21;7(2):e00135-16
pubmed: 27103626
PLoS One. 2016 Oct 12;11(10):e0164468
pubmed: 27732651
Nat Chem Biol. 2017 May;13(5):537-543
pubmed: 28319100
Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20655-60
pubmed: 23185008
Mol Cell. 2005 Dec 9;20(5):709-22
pubmed: 16337595
Nat Biotechnol. 2008 Dec;26(12):1367-72
pubmed: 19029910
Planta Med. 2016 Jun;82(9-10):816-31
pubmed: 27002400
Chembiochem. 2004 Jan 3;5(1):93-8
pubmed: 14695518
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Nat Ecol Evol. 2018 Nov;2(11):1709-1714
pubmed: 30323207
J Am Chem Soc. 2010 Sep 22;132(37):12941-5
pubmed: 20795624
Mar Drugs. 2012 Jun;10(6):1212-24
pubmed: 22822368
Nat Chem Biol. 2019 Aug;15(8):813-821
pubmed: 31308532
Proc Natl Acad Sci U S A. 2017 Jan 3;114(1):95-100
pubmed: 27994138
Chem Biol. 2013 May 23;20(5):636-47
pubmed: 23706630
Nucleic Acids Res. 2019 Jul 2;47(W1):W256-W259
pubmed: 30931475
Proc Natl Acad Sci U S A. 2018 Feb 20;115(8):1718-1723
pubmed: 29439203
ISME J. 2013 Feb;7(2):438-43
pubmed: 23038173
Genome Res. 2017 May;27(5):824-834
pubmed: 28298430
Angew Chem Int Ed Engl. 2014 Aug 4;53(32):8503-7
pubmed: 24943072
FEMS Microbiol Ecol. 2010 Jun;72(3):328-42
pubmed: 20412301
Nat Commun. 2016 Jun 16;7:11870
pubmed: 27306690
Nat Microbiol. 2019 Jul;4(7):1149-1159
pubmed: 30936484
ISME J. 2016 Dec;10(12):2801-2816
pubmed: 27300277
Science. 2001 Mar 2;291(5509):1790-2
pubmed: 11230695
PLoS One. 2019 May 2;14(5):e0216319
pubmed: 31048920
Nat Chem. 2017 Apr;9(4):387-395
pubmed: 28338684
mSystems. 2017 Nov 21;2(6):
pubmed: 29181447
Genome Res. 2015 Jul;25(7):1043-55
pubmed: 25977477
Chem. 2017 Mar 9;2(3):334-358
pubmed: 28948238
Proc Natl Acad Sci U S A. 2002 Oct 29;99(22):14002-7
pubmed: 12381784
ACS Chem Biol. 2018 May 18;13(5):1123-1129
pubmed: 29570981
Methods Mol Biol. 2010;668:247-64
pubmed: 20830569
Nat Rev Microbiol. 2012 Sep;10(9):641-54
pubmed: 22842661
Nat Prod Rep. 2016 Feb;33(2):231-316
pubmed: 26689670
Appl Environ Microbiol. 2004 Aug;70(8):4921-9
pubmed: 15294832
Nature. 2018 Jun;558(7710):440-444
pubmed: 29899444
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Nucleic Acids Res. 2017 Jul 3;45(W1):W36-W41
pubmed: 28460038
Nat Prod Rep. 2016 Apr;33(4):549-61
pubmed: 26867978
Chem Biol. 2012 Jan 27;19(1):85-98
pubmed: 22284357
Nat Chem Biol. 2014 Aug;10(8):648-55
pubmed: 24974231
Angew Chem Int Ed Engl. 2012 Nov 12;51(46):11611-5
pubmed: 23055407
Proc Natl Acad Sci U S A. 2014 Aug 19;111(33):E3376-85
pubmed: 25097259
Nat Chem Biol. 2009 Jul;5(7):494-501
pubmed: 19448639
J Nat Prod. 2007 Jan;70(1):89-94
pubmed: 17253855
J Nat Prod. 2017 Jul 28;80(7):2170-2173
pubmed: 28696720
Appl Environ Microbiol. 2002 Sep;68(9):4431-40
pubmed: 12200297
Mar Drugs. 2014 Aug 19;12(8):4539-77
pubmed: 25196730
Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):E3129-37
pubmed: 23898213
Environ Microbiol Rep. 2017 Dec;9(6):750-755
pubmed: 28892304
PLoS One. 2011 Mar 22;6(3):e17897
pubmed: 21445351
Mol Biol Evol. 2017 Aug 1;34(8):2115-2122
pubmed: 28460117
Microbiome. 2018 Mar 9;6(1):46
pubmed: 29523192
PeerJ. 2015 Aug 27;3:e1165
pubmed: 26336640
Science. 2012 Oct 19;338(6105):387-90
pubmed: 22983711

Auteurs

Michael Rust (M)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.

Eric J N Helfrich (EJN)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.

Michael F Freeman (MF)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.
Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota Twin Cities, St. Paul, MN 55108.
BioTechnology Institute, University of Minnesota Twin Cities, St. Paul, MN 55108.

Pakjira Nanudorn (P)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.

Christopher M Field (CM)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.

Christian Rückert (C)

Institute for Genome Research and Systems Biology, Center for Biotechnology, Universität Bielefeld, 33594 Bielefeld, Germany.

Tomas Kündig (T)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.

Michael J Page (MJ)

Aquaculture, Coasts and Oceans, National Institute of Water and Atmospheric Research Ltd., 7010 Nelson, New Zealand.

Victoria L Webb (VL)

Aquaculture, Coasts and Oceans, National Institute of Water and Atmospheric Research Ltd., 6021 Wellington, New Zealand.

Jörn Kalinowski (J)

Institute for Genome Research and Systems Biology, Center for Biotechnology, Universität Bielefeld, 33594 Bielefeld, Germany.

Shinichi Sunagawa (S)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland.

Jörn Piel (J)

Institute of Microbiology, ETH Zurich, 8093 Zurich, Switzerland; jpiel@ethz.ch.

Articles similaires

Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice
Animals Tail Swine Behavior, Animal Animal Husbandry

Classifications MeSH