Multiple links between 5-methylcytosine content of mRNA and translation.

5-Methylcytosine / chemistry HeLa Cells Humans Polyribosomes / chemistry Protein Biosynthesis RNA, Messenger / chemistry
5-Methylcytosine Bisulfite RNA-seq Bisulfite conversion Epitranscriptome NSUN2 Polysome RNA methylation RNA stability TRDMT1 mRNA translation

Journal

BMC biology
ISSN: 1741-7007
Titre abrégé: BMC Biol
Pays: England
ID NLM: 101190720

Informations de publication

Date de publication:
15 04 2020
Historique:
received: 26 02 2020
accepted: 11 03 2020
entrez: 16 4 2020
pubmed: 16 4 2020
medline: 13 1 2021
Statut: epublish

Résumé

5-Methylcytosine (m We obtained ~ 1000 candidate m Our findings emphasise the major role of NSUN2 in placing the m

Sections du résumé

BACKGROUND
5-Methylcytosine (m
RESULTS
We obtained ~ 1000 candidate m
CONCLUSIONS
Our findings emphasise the major role of NSUN2 in placing the m

Identifiants

DOI: 10.1186/s12915-020-00769-5 PMID: 32293435 PMC: PMC7158060
pubmed: 32293435
doi: 10.1186/s12915-020-00769-5
pii: 10.1186/s12915-020-00769-5
pmc: PMC7158060
doi:

Substances chimiques

RNA, Messenger 0
5-Methylcytosine 6R795CQT4H

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

40

Références

Nucleic Acids Res. 2012 Jun;40(11):5023-33
pubmed: 22344696
Curr Biol. 2019 Aug 5;29(15):2465-2476.e5
pubmed: 31327714
Cell Res. 2017 May;27(5):606-625
pubmed: 28418038
Methods Mol Biol. 2016;1358:269-84
pubmed: 26463389
Nucleic Acids Res. 2019 Jun 20;47(11):5522-5529
pubmed: 31114894
Nat Cell Biol. 2019 Aug;21(8):978-990
pubmed: 31358969
mBio. 2019 Jun 11;10(3):
pubmed: 31186331
Chem Biol. 2014 Feb 20;21(2):174-85
pubmed: 24315934
Transl Res. 2015 Jan;165(1):28-35
pubmed: 24768686
Nat Struct Mol Biol. 2019 May;26(5):380-388
pubmed: 31061524
Algorithms Mol Biol. 2011 Nov 24;6:26
pubmed: 22115189
Mol Cell. 2019 Sep 19;75(6):1188-1202.e11
pubmed: 31399345
Genome Biol. 2013 Nov 29;14(11):215
pubmed: 24286375
Nat Biotechnol. 2013 May;31(5):458-64
pubmed: 23604283
FEBS Lett. 2014 Nov 28;588(23):4297-304
pubmed: 25220675
Nat Methods. 2005 Oct;2(10):731-4
pubmed: 16179916
EMBO J. 2014 Sep 17;33(18):2020-39
pubmed: 25063673
FEBS Lett. 2010 Jan 21;584(2):265-71
pubmed: 19931536
Mol Cell. 2019 May 16;74(4):640-650
pubmed: 31100245
Epigenomics. 2019 Feb;11(4):439-453
pubmed: 30526041
Nucleic Acids Res. 2013 Oct;41(19):9062-76
pubmed: 23913415
Mol Plant. 2017 Nov 6;10(11):1387-1399
pubmed: 28965832
Genome Biol. 2017 Jan 5;18(1):1
pubmed: 28077169
Curr Opin Cell Biol. 2014 Dec;31:1-7
pubmed: 25014650
Cell Rep. 2013 Jul 25;4(2):255-61
pubmed: 23871666
OMICS. 2012 May;16(5):284-7
pubmed: 22455463
Bioinformatics. 2017 Nov 15;33(22):3645-3647
pubmed: 29036507
RNA Biol. 2017 Sep 2;14(9):1138-1152
pubmed: 27911188
Bioinformatics. 2014 Aug 1;30(15):2114-20
pubmed: 24695404
Genes (Basel). 2019 Jan 30;10(2):
pubmed: 30704115
Wiley Interdiscip Rev RNA. 2019 Jan;10(1):e1510
pubmed: 30311405
Open Biol. 2017 May;7(5):
pubmed: 28566301
Annu Rev Genet. 2018 Nov 23;52:349-372
pubmed: 30230927
Genome Res. 2017 Sep;27(9):1589-1596
pubmed: 28684555
PLoS Genet. 2013 Jun;9(6):e1003602
pubmed: 23825970
Nat Commun. 2016 Aug 25;7:12626
pubmed: 27558897
Wiley Interdiscip Rev RNA. 2016 Nov;7(6):838-842
pubmed: 27444144
Wiley Interdiscip Rev RNA. 2019 Nov;10(6):e1547
pubmed: 31144457
J Biol Chem. 1972 Jun 25;247(12):3864-7
pubmed: 4338231
Nat Rev Mol Cell Biol. 2019 Oct;20(10):608-624
pubmed: 31520073
Curr Opin Chem Biol. 2017 Dec;41:93-98
pubmed: 29125941
Cold Spring Harb Perspect Biol. 2019 Jun 3;11(6):
pubmed: 31160350
Proc Natl Acad Sci U S A. 1974 Oct;71(10):3971-5
pubmed: 4372599
Cell. 2006 Jun 16;125(6):1111-24
pubmed: 16777601
Nucleic Acids Res. 2018 Jan 4;46(D1):D303-D307
pubmed: 29106616
Biochim Biophys Acta. 2016 Jan;1859(1):59-70
pubmed: 26541084
Gene Expr Patterns. 2013 Dec;13(8):319-27
pubmed: 23816522
Methods. 2016 Sep 1;107:42-7
pubmed: 27208508
Curr Opin Microbiol. 2016 Apr;30:50-57
pubmed: 26803287
Brain Res. 2016 Jul 1;1642:546-552
pubmed: 27117867
Curr Opin Chem Biol. 2016 Feb;30:46-51
pubmed: 26625014
Science. 2016 Jan 15;351(6270):282-5
pubmed: 26816380
J Integr Plant Biol. 2016 Oct;58(10):822-835
pubmed: 27172004
Nature. 2016 Jun 15;534(7607):335-40
pubmed: 27306184
Nucleic Acids Res. 1975 Jun;2(6):887-95
pubmed: 167355
Mol Cell. 2016 May 5;62(3):462-471
pubmed: 27153541
Bioinformatics. 2010 Jan 1;26(1):139-40
pubmed: 19910308
Nat Chem Biol. 2014 Feb;10(2):93-5
pubmed: 24316715
FEBS Lett. 2019 Jul;593(13):1483-1493
pubmed: 31206634
Genes Dev. 2010 Aug 1;24(15):1590-5
pubmed: 20679393
Methods Enzymol. 2007;431:83-111
pubmed: 17923232
Genome Biol. 2012 Oct 03;13(10):R87
pubmed: 23034086
Genome Biol. 2012 Oct 31;13(10):175
pubmed: 23113984
Nucleic Acids Res. 1975 Oct;2(10):1653-68
pubmed: 1187339
Chem Sci. 2016 Aug 1;7(8):5495-5502
pubmed: 30034689
Genes (Basel). 2019 Jan 09;10(1):
pubmed: 30634534
Bioinformatics. 2016 Mar 1;32(5):782-5
pubmed: 26543174
Plant Cell. 2017 Mar;29(3):445-460
pubmed: 28062751
Bioinformation. 2007 May 20;2(1):5-7
pubmed: 18084642
Nature. 2012 Apr 29;485(7397):201-6
pubmed: 22575960
Mol Cell. 2013 Jan 10;49(1):18-29
pubmed: 23177736
Trends Plant Sci. 2019 Apr;24(4):328-341
pubmed: 30745055
Cell Rep. 2016 Jan 26;14(3):479-492
pubmed: 26774474
Nucleic Acids Res. 1976 Feb;3(2):431-40
pubmed: 1257055
Cell. 2012 Jun 22;149(7):1635-46
pubmed: 22608085
J Mol Biol. 1978 Sep 25;124(3):487-99
pubmed: 712844
Bioinformatics. 2011 Jun 1;27(11):1571-2
pubmed: 21493656
Nucleic Acids Res. 2016 Jan 4;44(D1):D184-9
pubmed: 26673694
Nat Commun. 2018 Mar 21;9(1):1163
pubmed: 29563491
Int J Genomics. 2018 Jun 13;2018:1351964
pubmed: 30009162
Chem Commun (Camb). 2016 Jan 14;52(4):737-40
pubmed: 26562407
Curr Opin Plant Biol. 2015 Oct;27:17-21
pubmed: 26048078
Mol Cell. 2018 Jan 4;69(1):126-135.e6
pubmed: 29304330
Bioinformatics. 2010 Mar 15;26(6):841-2
pubmed: 20110278
J Virol. 2017 Apr 13;91(9):
pubmed: 28250115
Wiley Interdiscip Rev RNA. 2013 Jul-Aug;4(4):397-422
pubmed: 23681756
Int J Mol Sci. 2017 Nov 10;18(11):
pubmed: 29125541
Nature. 2014 Jan 2;505(7481):117-20
pubmed: 24284625
Cell. 2018 Dec 13;175(7):1872-1886.e24
pubmed: 30449621
Biochem Biophys Res Commun. 2019 Nov 26;520(1):60-66
pubmed: 31570165
Annu Rev Cell Dev Biol. 2017 Oct 6;33:319-342
pubmed: 28759256
Cell Host Microbe. 2019 Aug 14;26(2):217-227.e6
pubmed: 31415754

Auteurs

Ulrike Schumann (U)

EMBL-Australia Collaborating Group, Department of Genome Sciences, John Curtin School of Medical Research, Australian National University, Canberra, 2601, Australian Captial Territory, Australia.

He-Na Zhang (HN)

CAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institute of Nutrition and Health, Shanghai Institutes for Biological Sciences, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai, 200031, China.

Tennille Sibbritt (T)

EMBL-Australia Collaborating Group, Department of Genome Sciences, John Curtin School of Medical Research, Australian National University, Canberra, 2601, Australian Captial Territory, Australia.

Anyu Pan (A)

EMBL-Australia Collaborating Group, Department of Genome Sciences, John Curtin School of Medical Research, Australian National University, Canberra, 2601, Australian Captial Territory, Australia.

Attila Horvath (A)

EMBL-Australia Collaborating Group, Department of Genome Sciences, John Curtin School of Medical Research, Australian National University, Canberra, 2601, Australian Captial Territory, Australia.

Simon Gross (S)

EMBL-Australia Collaborating Group, Department of Genome Sciences, John Curtin School of Medical Research, Australian National University, Canberra, 2601, Australian Captial Territory, Australia.

Susan J Clark (SJ)

Genomics and Epigenetics Division, Garvan Institute of Medical Research, Sydney, 2010, New South Wales, Australia.
Faculty of Medicine, St Vincent's Clinical School, University of New South Wales, Sydney, New South Wales, 2010, Australia.

Li Yang (L)

CAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institute of Nutrition and Health, Shanghai Institutes for Biological Sciences, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai, 200031, China.
School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.

Thomas Preiss (T)

EMBL-Australia Collaborating Group, Department of Genome Sciences, John Curtin School of Medical Research, Australian National University, Canberra, 2601, Australian Captial Territory, Australia. thomas.preiss@anu.edu.au.
Victor Chang Cardiac Research Institute, Sydney, New South Wales, 2010, Australia. thomas.preiss@anu.edu.au.

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Classifications MeSH

questionsmedicales.fr › Composés hétérocycliques › Composés hétéromonocycliques › Pyrimidines › Pyrimidinones › Cytosine › 5-Méthyl-cytosine › Multiple links between 5-methylcytosine...
questionsmedicales.fr › Cellules › Cellules épithéliales › Cellules HeLa › Multiple links between 5-methylcytosine...
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Primates › Haplorhini › Catarrhini › Hominidae › Humains › Multiple links between 5-methylcytosine...
questionsmedicales.fr › Cellules › Structures cellulaires › Espace intracellulaire › Cytoplasme › Structures cytoplasmiques › Organites › Ribosomes › Polyribosomes › Multiple links between 5-methylcytosine...
questionsmedicales.fr › Phénomènes génétiques › Expression des gènes › Biosynthèse des protéines › Multiple links between 5-methylcytosine...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN messager › Multiple links between 5-methylcytosine...