Detection of Allosteric Effects of lncRNA Secondary Structures Altered by SNPs in Human Diseases.
human diseases
linkage-disequilibrium SNPs
lncRNA secondary structure
structural heterogeneity
transcription factors
Journal
Frontiers in cell and developmental biology
ISSN: 2296-634X
Titre abrégé: Front Cell Dev Biol
Pays: Switzerland
ID NLM: 101630250
Informations de publication
Date de publication:
2020
2020
Historique:
received:
06
02
2020
accepted:
23
03
2020
entrez:
24
4
2020
pubmed:
24
4
2020
medline:
24
4
2020
Statut:
epublish
Résumé
Recent studies have shown that structuralized long non-coding RNAs (lncRNAs) play important roles in genetic and epigenetic processes. The spatial structures of most lncRNAs can be altered by distinct
Identifiants
pubmed: 32322582
doi: 10.3389/fcell.2020.00242
pmc: PMC7156602
doi:
Types de publication
Journal Article
Langues
eng
Pagination
242Informations de copyright
Copyright © 2020 Lu, Ding, Bai, Li, Zhang, Wang, Gao, Xu and Wang.
Références
BMC Cancer. 2019 Aug 5;19(1):769
pubmed: 31382924
Cell. 2018 Jul 26;174(3):564-575.e18
pubmed: 30033362
Nat Genet. 2013 Apr;45(4):385-91, 391e1-2
pubmed: 23535732
Nucleic Acids Res. 2017 Jul 3;45(W1):W365-W373
pubmed: 28521030
PLoS Genet. 2010 Aug 19;6(8):e1001074
pubmed: 20808897
Nature. 2014 Jan 30;505(7485):706-9
pubmed: 24476892
Acta Pharmacol Sin. 2018 Nov;39(11):1797-1803
pubmed: 30154526
RNA. 2012 Jan;18(1):77-87
pubmed: 22109839
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Front Immunol. 2019 Mar 08;10:420
pubmed: 30906297
Nat Commun. 2019 Jun 12;10(1):2569
pubmed: 31189880
Am J Hum Genet. 2007 Sep;81(3):559-75
pubmed: 17701901
Eur J Pharmacol. 2018 Mar 15;823:19-26
pubmed: 29378193
BMC Genomics. 2013;14 Suppl 6:S5
pubmed: 24564251
Cancer Lett. 2017 Aug 1;400:194-202
pubmed: 28259822
BMC Bioinformatics. 2010 Mar 15;11:129
pubmed: 20230624
Eur Rev Med Pharmacol Sci. 2017 May;21(10):2385-2391
pubmed: 28617551
Biochem Biophys Res Commun. 2017 Apr 8;485(3):679-685
pubmed: 28235488
Nucleic Acids Res. 2018 Feb 16;46(3):1113-1123
pubmed: 29325141
Nature. 2015 Oct 1;526(7571):75-81
pubmed: 26432246
Nucleic Acids Res. 2001 Jan 1;29(1):308-11
pubmed: 11125122
Nucleic Acids Res. 2018 Sep 28;46(17):8888-8897
pubmed: 30010932
J Hematol Oncol. 2014 Dec 10;7:90
pubmed: 25491133
Nat Genet. 2016 May;48(5):500-9
pubmed: 27064257
J Cell Biochem. 2018 Jul;119(7):5126-5134
pubmed: 29091292
Biochem Biophys Res Commun. 2019 Jun 18;514(1):118-126
pubmed: 31027730
Nucleic Acids Res. 2017 Jan 4;45(D1):D819-D826
pubmed: 27899644
J Am Soc Nephrol. 2018 Jul;29(7):2000-2013
pubmed: 29903748
Genome Res. 2012 Sep;22(9):1760-74
pubmed: 22955987
Nucleic Acids Res. 2015 Jul 1;43(W1):W174-81
pubmed: 25883148
Nature. 2015 Oct 1;526(7571):68-74
pubmed: 26432245
Bioinformatics. 2009 Aug 1;25(15):1974-5
pubmed: 19398448
Cancer Res. 2015 Sep 15;75(18):3728-37
pubmed: 26208906
Clin Chim Acta. 2020 May;504:190-200
pubmed: 31790697
Bioinformatics. 2013 Nov 15;29(22):2928-30
pubmed: 23975767
Sci Rep. 2016 Oct 07;6:34234
pubmed: 27713484
Methods Mol Biol. 2016;1490:199-215
pubmed: 27665601
Gac Med Mex. 2017 Mar - Apr;153(2):238-250
pubmed: 28474710