Technical note: Random forests prediction of daily eating time of dairy cows from 3-dimensional accelerometer and radiofrequency identification.


Journal

Journal of dairy science
ISSN: 1525-3198
Titre abrégé: J Dairy Sci
Pays: United States
ID NLM: 2985126R

Informations de publication

Date de publication:
Jul 2020
Historique:
received: 19 09 2019
accepted: 04 02 2020
pubmed: 26 4 2020
medline: 11 11 2020
entrez: 26 4 2020
Statut: ppublish

Résumé

Feed intake and time spent eating at the feed bunk are important predictors of dairy cows' productivity and animal welfare, and deviations from normal eating behavior may indicate subclinical or clinical disease. In the current study, we developed a random forests algorithm to predict dairy cows' daily eating time (of a total mixed ration from a common feed bunk) using data from a 3-dimensional accelerometer and a radiofrequency identification (RFID) prototype device (logger) mounted on a neck collar. Models were trained on continuous focal animal observations from a total of 24 video recordings of 18 dairy cows at the Danish Cattle Research Centre (Foulum, Tjele, Denmark). Each session lasted from 21 to 48 h. The models included both the present time signal and observations several seconds back in time (lag window). These time-lagged signals were included with the purpose of capturing changes over time. Because of the high costs of installing an RFID antenna in the feed bunk, we also investigated a model based solely on 3-dimensional accelerometer data. Furthermore, to address the trade-off between prediction accuracy and reduced model complexity and its implications for battery longevity, we investigated the importance of including observations back in time using lag window sizes between 8 and 128 s. Performance was evaluated by internal leave-one-cow-out cross-validation. The results indicated that we obtained accurate predictions of daily eating time. For the most complex model (a lag window size of 128 s), the median of the balanced accuracy was 0.95 (interquartile interval: 0.93 to 0.96), and the median daily eating time deviation was 7 min 37 s (interquartile interval: -6 to 15 min). The median of the average daily eating time during sessions was 3 h 41 min with an interquartile interval of 2 h 56 min to 4 h 16 min. Exclusion of RFID data resulted in a considerable decrease in prediction accuracy, mainly due to a decreased sensitivity of locating the cow at the feed bunk (median balanced accuracy of 0.87 at a lag window size of 128 s). In contrast, prediction accuracy only slightly decreased with decreasing lag window size (median balanced accuracy of 0.94 at a lag window size of 8 s). We suggest a lag window size of 64 s for further development of the prototype logger. The methodology presented in this paper may be relevant for future automatic recordings of eating behavior in commercial dairy herds.

Identifiants

pubmed: 32331900
pii: S0022-0302(20)30306-4
doi: 10.3168/jds.2019-17613
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

6271-6275

Informations de copyright

Copyright © 2020 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Auteurs

Leslie Foldager (L)

Department of Animal Science, Aarhus University, DK8830 Tjele, Denmark; Bioinformatics Research Centre, Aarhus University, DK8000 Aarhus C, Denmark. Electronic address: leslie@anis.au.dk.

Philipp Trénel (P)

AgroTech, Danish Technological Institute, DK8200 Aarhus N, Denmark.

Lene Munksgaard (L)

Department of Animal Science, Aarhus University, DK8830 Tjele, Denmark.

Peter T Thomsen (PT)

Department of Animal Science, Aarhus University, DK8830 Tjele, Denmark.

Articles similaires

Smoking Cessation and Incident Cardiovascular Disease.

Jun Hwan Cho, Seung Yong Shin, Hoseob Kim et al.
1.00
Humans Male Smoking Cessation Cardiovascular Diseases Female
Humans United States Aged Cross-Sectional Studies Medicare Part C
1.00
Humans Yoga Low Back Pain Female Male
Humans Meals Time Factors Female Adult

Classifications MeSH