Comparison of Antimicrobial Resistance Detected in Environmental and Clinical Isolates from Historical Data for the US.
Journal
BioMed research international
ISSN: 2314-6141
Titre abrégé: Biomed Res Int
Pays: United States
ID NLM: 101600173
Informations de publication
Date de publication:
2020
2020
Historique:
received:
19
12
2019
revised:
12
02
2020
accepted:
22
02
2020
entrez:
1
5
2020
pubmed:
1
5
2020
medline:
11
2
2021
Statut:
epublish
Résumé
Antimicrobial resistance (AMR) has become an urgent public health issue, as pathogens are becoming increasingly resistant to commonly used antimicrobials. While AMR isolate data are available in the NCBI Pathogen Detection Isolates Browser (NPDIB) database, few researches have been performed to compare antimicrobial resistance detected in environmental and clinical isolates. To address this, this work conducted the first multivariate statistical analysis of antimicrobial-resistance pathogens detected in NPDIB clinical and environmental isolates for the US from 2013 to 2018. The highly occurring AMR genes and pathogens were identified for both clinical and environmental settings, and the historical profiles of those genes and pathogens were then compared for the two settings. It was found that
Identifiants
pubmed: 32351993
doi: 10.1155/2020/4254530
pmc: PMC7174961
doi:
Substances chimiques
Escherichia coli Proteins
0
Types de publication
Comparative Study
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
4254530Informations de copyright
Copyright © 2020 Megan Hua et al.
Déclaration de conflit d'intérêts
The authors declare no competing interests.
Références
Plasmid. 2009 Sep;62(2):57-70
pubmed: 19465049
Clin Microbiol Rev. 2011 Oct;24(4):718-33
pubmed: 21976606
Future Microbiol. 2007 Oct;2(5):493-500
pubmed: 17927472
Am J Public Health. 2015 Dec;105(12):2409-10
pubmed: 26469675
J Dairy Sci. 1991 Apr;74(4):1428-32
pubmed: 1860984
Gene. 1989 Feb 20;75(2):271-88
pubmed: 2653965
Nucleic Acids Res. 1986 Nov 11;14(21):8625-35
pubmed: 3024112
Foodborne Pathog Dis. 2017 Oct;14(10):545-557
pubmed: 28792800
Bioinformatics. 2003 Jun 12;19(9):1070-8
pubmed: 12801867
J Antimicrob Chemother. 2008 Jul;62(1):65-71
pubmed: 18413319
Antimicrob Agents Chemother. 2005 Jul;49(7):2965-71
pubmed: 15980376
J Clin Microbiol. 1998 Feb;36(2):437-42
pubmed: 9466754
Emerg Infect Dis. 2011 Jan;17(1):16-22
pubmed: 21192849
Int J Environ Res Public Health. 2019 May 22;16(10):
pubmed: 31121814
Antimicrob Agents Chemother. 2009 Aug;53(8):3582-4
pubmed: 19528276
J Bacteriol. 1996 Apr;178(7):1821-8
pubmed: 8606154
Bioinformatics. 2005 Feb 1;21(3):364-78
pubmed: 15374873
Infect Genet Evol. 2015 Mar;30:15-18
pubmed: 25461693
Biochemistry. 1997 Mar 18;36(11):3050-5
pubmed: 9115979
J Microbiol Biotechnol. 2014 Mar 28;24(3):297-312
pubmed: 24375418
J Antimicrob Chemother. 2005 Apr;55(4):558-61
pubmed: 15722395
Antimicrob Agents Chemother. 2001 Oct;45(10):2716-22
pubmed: 11557460
Front Microbiol. 2018 Sep 05;9:2057
pubmed: 30233535
Sci Rep. 2020 Apr 6;10(1):5970
pubmed: 32249837
Antimicrob Agents Chemother. 2003 Sep;47(9):2993-6
pubmed: 12937011
PLoS One. 2015 Sep 09;10(9):e0137697
pubmed: 26352414
Plasmid. 2005 May;53(3):218-38
pubmed: 15848226
Genomics. 2020 Jan;112(1):528-544
pubmed: 30974149
Appl Environ Microbiol. 2008 Nov;74(21):6803-5
pubmed: 18791008
Emerg Infect Dis. 2011 Jan;17(1):7-15
pubmed: 21192848
J Food Prot. 2019 Nov;82(11):1938-1949
pubmed: 31633426
Antimicrob Agents Chemother. 1974 Feb;5(2):133-8
pubmed: 4599859
Int J Environ Res Public Health. 2020 Jan 10;17(2):
pubmed: 31936874
Front Microbiol. 2019 Apr 17;10:832
pubmed: 31057528
Clin Infect Dis. 2002 Jun 1;34 Suppl 3:S111-22
pubmed: 11988881
Antimicrob Agents Chemother. 2019 Oct 22;63(11):
pubmed: 31427293
J Antimicrob Chemother. 1982 Jan;9 Suppl A:199-203
pubmed: 6210667